| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_1343 |
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| Symbol | prtB |
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| ID | 6145994 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli SMS-3-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010498 |
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| Strand | + |
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| Start bp | 1331254 |
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| End bp | 1333314 |
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| Gene Length | 2061 bp |
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| Protein Length | 686 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 641616220 |
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| Product | protease 2 |
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| Protein accession | YP_001743400 |
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| Protein GI | 170682850 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1770] Protease II |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.790431 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 40 |
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| Fosmid unclonability p-value | 0.26509 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTACCAA AAGCCGCCCG CATTCCCCAC GCCATGACGC TTCATGGCGA TACGCGCATC
GATAATTACT ACTGGCTGCG GGACGATACG CGTTCTCAGC CGAAAGTCCT GGACTACCTG
CAGCAAGAAA ATAGTTACGG TCATCGGGTG ATGGCCTCGC AACAAGCCTT GCAGGATCGC
ATCTTAAAGG AAATCATCGA CCGCATTCCG CAAAGAGAAG TTTCTGCGCC CTACATAAAA
AATGGCTACC GCTATCGGCA GATTTATGAA CCAGGCTGTG AATATGCTAT CTACCAGCGT
CAATCGGCAT TCAGTGAAGA GTGGGATGAG TGGGAAACAT TGCTCGATGC CAATAAGCGC
GCGGCGCACA GTGAGTTTTA TTCGATGGGC GGAATGGCGA TTACGCCCGA TAACACCATT
ATGGCGCTGG CAGAAGATTT TCTTTCCCGA CGCCAGTACG GCATTCGTTT TCGTAATCTG
GAAACTGGTA ACTGGTACCC GGAACTGCTG GATAACGTTG AACCCAGCTT TGTCTGGGCA
AATGACTCCT GGACTTTCTA CTATGTACGC AAGCATCCAG TTACGCTGCT GCCTTATCAG
GTCTGGCGTC ACGCCATCGG TACGCCAGCA TCGCAAGATA CACTGATCTA CGAAGAAAAA
GACGATACCT ATTACGTCAG CCTGCATAAA ACGACCTCGA AGCACTATGT AGTCATTCAT
CTGGCCAGCG CCACCACCAG TGAAGTTCGC CTGCTGGACG CGGAATTGGC CGATGCCGAG
CCGTTTGTTT TTCTGCCGCG CCGCAAAGAT CACGAATACA GCCTTGATCA CTACCAGCAT
CGTTTTTATC TGCGTTCCAA CCGCCACGGC AAAAACTTTG GCTTATACCG TACCCGTATG
CGTGATGAGC AACAGTGGGA AGAGTTAATT CCGCCACGTG ATAACATTAT GCTGGAAGGG
TTTACGCTGT TTACCGACTG GCTGGTGGTT GAAGAGCGTC AGCGCGGGTT AACCAGTTTG
CGGCAAATTA ACCGCAAGAC CCGGGAAGTC ATTGGCATTG CCTTTGATGA TCCGGCCTAT
GTGACCTGGA TTGCCTACAA TCCAGAACCT GAAACCGCGC GATTGCGTTA TGGTTATTCT
TCCATGACCA CACCAGACAC TCTGTTTGAA CTGGATATGG ATACCGGTGA GCGTCGTGTA
TTAAAACAAA CGGAAGTTCC TGGTTTTGAT GCGGCGAATT ACCGCAGTGA ACACCTGTGG
ATAGTCGCCC GGGATGGCGT CGAAGTTCCG GTTTCGTTGG TCTACCATCG CAAACATTTT
CGCAAAGGAC ACAACCCGCT GCTGGTGTAT GGCTACGGTT CTTACGGCGC AAGTATTGAT
GCCGATTTCA GTTTTAGCCG CTTGAGTTTG TTAGATCGTG GCTTTGTCTA CGCCATTGTC
CATGTTCGCG GCGGTGGTGA GCTGGGGCAA CAATGGTACG AAGACGGAAA ATTCCTGAAG
AAGAAAAATA CGTTTAATGA TTATCTTGAT GCCTGCGATG CATTGTTAAA ACTGGGCTAT
GGATCACCTT CGCTCTGTTA TGCGATGGGC GGGAGTGCCG GGGGCATGTT GATGGGCGTT
GCAATTAATC AACGCCCGGA ATTATTCCAC GGCGTTATCG CCCAGGTACC GTTTGTTGAT
GTTGTAACAA CGATGCTTGA TGAATCAATT CCTCTTACCA CTGGTGAGTT TGAAGAGTGG
GGGAATCCGC AGGATCCGCA ATATTACGAG TACATGAAAA GCTACAGCCC GTATGACAAC
GTCACCGCAC AGGCTTATCC GCATTTACTG GTAACGACCG GTTTACACGA TTCTCAGGTG
CAATATTGGG AACCGGCAAA ATGGGTGGCT AAATTGCGCG AGCTGAAAAC CGATAACCAT
CTTTTATTGC TCTGTACCGA CATGGACTCA GGCCATGGCG GTAAATCTGG CCGCTTTAAA
TCGTACGAAG GCGTAGCGAT GGAATATGCT TTTCTGGTCG CGCTGGCGCA GGGAACATTA
CCCGCTACGC CTGAGGATTA A
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| Protein sequence | MLPKAARIPH AMTLHGDTRI DNYYWLRDDT RSQPKVLDYL QQENSYGHRV MASQQALQDR
ILKEIIDRIP QREVSAPYIK NGYRYRQIYE PGCEYAIYQR QSAFSEEWDE WETLLDANKR
AAHSEFYSMG GMAITPDNTI MALAEDFLSR RQYGIRFRNL ETGNWYPELL DNVEPSFVWA
NDSWTFYYVR KHPVTLLPYQ VWRHAIGTPA SQDTLIYEEK DDTYYVSLHK TTSKHYVVIH
LASATTSEVR LLDAELADAE PFVFLPRRKD HEYSLDHYQH RFYLRSNRHG KNFGLYRTRM
RDEQQWEELI PPRDNIMLEG FTLFTDWLVV EERQRGLTSL RQINRKTREV IGIAFDDPAY
VTWIAYNPEP ETARLRYGYS SMTTPDTLFE LDMDTGERRV LKQTEVPGFD AANYRSEHLW
IVARDGVEVP VSLVYHRKHF RKGHNPLLVY GYGSYGASID ADFSFSRLSL LDRGFVYAIV
HVRGGGELGQ QWYEDGKFLK KKNTFNDYLD ACDALLKLGY GSPSLCYAMG GSAGGMLMGV
AINQRPELFH GVIAQVPFVD VVTTMLDESI PLTTGEFEEW GNPQDPQYYE YMKSYSPYDN
VTAQAYPHLL VTTGLHDSQV QYWEPAKWVA KLRELKTDNH LLLLCTDMDS GHGGKSGRFK
SYEGVAMEYA FLVALAQGTL PATPED
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