Gene EcSMS35_1338 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcSMS35_1338 
SymbolpurT 
ID6146771 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli SMS-3-5 
KingdomBacteria 
Replicon accessionNC_010498 
Strand
Start bp1328046 
End bp1329224 
Gene Length1179 bp 
Protein Length392 aa 
Translation table11 
GC content54% 
IMG OID641616216 
Productphosphoribosylglycinamide formyltransferase 2 
Protein accessionYP_001743396 
Protein GI170684011 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0027] Formate-dependent phosphoribosylglycinamide formyltransferase (GAR transformylase) 
TIGRFAM ID[TIGR01142] phosphoribosylglycinamide formyltransferase 2 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones49 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGTTAT TAGGCACTGC GCTGCGTCCG GCAGCAACTC GCGTGATGTT ATTAGGCTCC 
GGTGAACTGG GTAAAGAAGT GGCAATCGAG TGTCAGCGTC TCGGCGTAGA GGTGATTGCC
GTCGATCGCT ATGCCGACGC GCCAGCTATG CATGTCGCGC ATCGCTCCCA TGTCATTAAT
ATGCTTGATG GTGATGCATT ACGCCGTGTG GTTGAACTGG AAAAACCACA TTATATCGTG
CCGGAGATCG AAGCTATTGC CACCGATATG CTGATCCAAC TTGAAGAGGA AGGACTGAAT
GTTGTCCCCT GCGCGCGCGC AACGAAATTA ACGATGAATC GCGAGGGTAT CCGTCGCCTG
GCGGCAGAAG AGCTGCAGCT GCCCACTTCC ACTTATCGTT TTGCCGATAG CGAAAACCTT
TTCCGCGAGG CGGTTGCTGA CATCGGCTAT CCCTGCATTG TTAAACCGGT GATGAGTTCC
TCCGGCAAGG GGCAGACGTT TATTCGTTCT GCAGAGCAAC TTGCTCAGGC ATGGGAGTAC
GCTCAGCAAG GCGGTCGCGC CGGAGCGGGC CGTGTAATTG TTGAAGGCGT CGTTAAGTTT
GATTTCGAAA TTACCCTGCT AACCGTCAGC GCGGTGGATG GCGTCCATTT CTGTGCACCG
GTAGGTCATC GCCAGGAAGA TGGCGACTAT CGTGAATCCT GGCAACCACA ACAAATGAGC
CCGCTTGCCC TTGAACGTGC GCAGGAGATT GCCCGTAAAG TGGTGCTGGC ACTGGGCGGT
TATGGGCTGT TTGGTGTCGA GCTGTTTGTC TGTGGTGATG AGGTGATTTT CAGTGAAGTC
TCCCCTCGCC CGCATGACAC CGGGATGGTG ACGCTAATTT CTCAGGATCT CTCGGAGTTT
GCCCTGCATG TACGTGCCTT CCTCGGACTT CCGGTTGGCG GGATCCGCCA GTATGGTCCT
GCTGCTTCTG CCGTTATCCT GCCGCAACTG ACCAGTCAGA ATGTCACGTT TGATAATGTG
CAGAATGCCG TAGGCGCAGA TTTACAGATT CGTTTATTTG GTAAGCCGGA AATTGATGGC
AGCCGTCGTC TGGGGGTAGC ACTGGCTACT GCAGAGAGTG TTGTTGACGC CATTGAACGC
GCGAAGCACG CCGCCGGACA GGTAAAAGTA CAGGGTTAA
 
Protein sequence
MTLLGTALRP AATRVMLLGS GELGKEVAIE CQRLGVEVIA VDRYADAPAM HVAHRSHVIN 
MLDGDALRRV VELEKPHYIV PEIEAIATDM LIQLEEEGLN VVPCARATKL TMNREGIRRL
AAEELQLPTS TYRFADSENL FREAVADIGY PCIVKPVMSS SGKGQTFIRS AEQLAQAWEY
AQQGGRAGAG RVIVEGVVKF DFEITLLTVS AVDGVHFCAP VGHRQEDGDY RESWQPQQMS
PLALERAQEI ARKVVLALGG YGLFGVELFV CGDEVIFSEV SPRPHDTGMV TLISQDLSEF
ALHVRAFLGL PVGGIRQYGP AASAVILPQL TSQNVTFDNV QNAVGADLQI RLFGKPEIDG
SRRLGVALAT AESVVDAIER AKHAAGQVKV QG