| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_1336 |
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| Symbol | edd |
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| ID | 6142790 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli SMS-3-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010498 |
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| Strand | + |
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| Start bp | 1325501 |
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| End bp | 1327312 |
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| Gene Length | 1812 bp |
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| Protein Length | 603 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 641616214 |
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| Product | phosphogluconate dehydratase |
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| Protein accession | YP_001743394 |
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| Protein GI | 170684043 |
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| COG category | [E] Amino acid transport and metabolism
[G] Carbohydrate transport and metabolism |
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| COG ID | [COG0129] Dihydroxyacid dehydratase/phosphogluconate dehydratase |
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| TIGRFAM ID | [TIGR01196] 6-phosphogluconate dehydratase |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 50 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACCCAC AATTGTTACG CGTAACAAAT CGAATCATTG AACGTTCGCG CGAGACTCGC
TCTGCTTATC TCGCCCGGAT AGAACAAGCG AAAACTTCGA CCGTTCATCG TTCGCAGTTG
GCATGCGGTA ACCTGGCACA CGGTTTCGCT GCCTGCCAGC CAGAAGACAA AGCCTCTTTG
AAAAGCATGT TGCGTAACAA TATCGCCATC ATCACCTCCT ATAACGACAT GCTCTCCGCG
CACCAGCCTT ATGAACACTA TCCAGAAATC ATTCGTAAAG CCCTGCATGA AGCAAATGCG
GTTGGTCAGG TTGCGGGCGG TGTTCCGGCG ATGTGTGATG GTGTCACCCA GGGGCAGGAT
GGAATGGAAT TGTCGCTGTT AAGCCGCGAA GTGATTGCGA TGTCTGCGGC GGTGGGGCTG
TCCCATAACA TGTTTGATGG TGCGCTGTTC CTCGGTGTGT GCGACAAGAT TGTTCCGGGT
CTGACTATGG CAGCCCTGTC GTTTGGGCAT TTGCCCGCGG TGTTTGTGCC GTCTGGACCG
ATGGCAAGCG GTTTGCCAAA TAAAGAAAAA GTGCGTATTC GTCAGCTTTA TGCCGAAGGT
AAAGTGGACC GCATGGCACT ACTGGAGTCA GAAGCCGCAT CTTATCATGC GCCGGGAACA
TGTACTTTCT ACGGTACTGC CAACACCAAC CAGATGGTGG TGGAGTTTAT GGGGATGCAG
TTGCCAGGCT CTTCATTTGT TCATCCGGAT TCTCCGCTGC GCGATGCTTT GACCGCAGCC
GCTGCGCGCC AGGTTACACG CATGACCGGT AATGGTAATG AATGGATGCC GATCGGTAAG
ATGATAGATG AGAAAGTGGT GGTGAACGGT ATCGTTGCAC TGCTGGCGAC CGGTGGTTCC
ACTAACCACA CCATGCACCT GGTGGCGATG GCACGCGCGG CCGGTATTCA GATTAACTGG
GATGACTTCT CTGACCTTTC TGATGTTGTA CCGCTGATGG CACGTCTCTA CCCGAACGGT
CCGGCTGATA TTAACCACTT CCAGGCGGCA GGTGGCGTAC CGGTTCTGGT GCGTGAACTG
CTCAAAGCAG GCCTGCTGCA TGAAGATGTC AATACGGTGG CAGGCTTTGG TCTGTCTCGT
TATACCCTTG AACCATGGCT GAATAATGGT GAACTGGACT GGCGGGAAGG GGCGGAAAAA
TCACTCGACA GCAATGTGAT CGCTTCCTTC GAACAACCTT TCTCTCATCA TGGTGGGACA
AAAGTGTTAA GCGGTAACCT GGGCCGTGCG GTTATGAAAA CCTCTGCCGT GCCGGTAGAG
AACCAGGTGA TTGAAGCGCC AGCGGTTGTT TTTGAAAGCC AGCATGACGT TATGCCGGCC
TTTGAAGCGG GTTTGCTGGA CCGCGATTGT GTCGTTGTTG TCCGTCATCA GGGGCCAAAA
GCGAACGGAA TGCCAGAATT ACATAAACTC ATGCCGCCAC TTGGTGTATT ATTGGACCGG
TGTTTCAAAA TTGCGTTAGT TACCGATGGA CGACTCTCCG GCGCTTCAGG TAAAGTGCCG
TCAGCTATCC ACGTAACACC AGAGGCCTAC GATGGCGGGC TGCTGGCAAA AGTGCGCGAC
GGGGACATCA TTCGTGTGAA TGGACAGACA GGCGAACTGA CGCTGCTGGT AGACGAAGCG
GAACTGGCTG CTCGCGAACC GCACATTCCT GACCTGAGCG CGTCACGCGT GGGAACAGGA
CGTGAATTAT TCAGCGCCTT GCGTGAAAAA CTGTCCGGTG CCGAACAGGG CGCAACCTGT
ATCACTTTTT AA
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| Protein sequence | MNPQLLRVTN RIIERSRETR SAYLARIEQA KTSTVHRSQL ACGNLAHGFA ACQPEDKASL
KSMLRNNIAI ITSYNDMLSA HQPYEHYPEI IRKALHEANA VGQVAGGVPA MCDGVTQGQD
GMELSLLSRE VIAMSAAVGL SHNMFDGALF LGVCDKIVPG LTMAALSFGH LPAVFVPSGP
MASGLPNKEK VRIRQLYAEG KVDRMALLES EAASYHAPGT CTFYGTANTN QMVVEFMGMQ
LPGSSFVHPD SPLRDALTAA AARQVTRMTG NGNEWMPIGK MIDEKVVVNG IVALLATGGS
TNHTMHLVAM ARAAGIQINW DDFSDLSDVV PLMARLYPNG PADINHFQAA GGVPVLVREL
LKAGLLHEDV NTVAGFGLSR YTLEPWLNNG ELDWREGAEK SLDSNVIASF EQPFSHHGGT
KVLSGNLGRA VMKTSAVPVE NQVIEAPAVV FESQHDVMPA FEAGLLDRDC VVVVRHQGPK
ANGMPELHKL MPPLGVLLDR CFKIALVTDG RLSGASGKVP SAIHVTPEAY DGGLLAKVRD
GDIIRVNGQT GELTLLVDEA ELAAREPHIP DLSASRVGTG RELFSALREK LSGAEQGATC
ITF
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