| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_1328 |
|---|
| Symbol | znuC |
|---|
| ID | 6143998 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli SMS-3-5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010498 |
|---|
| Strand | - |
|---|
| Start bp | 1316688 |
|---|
| End bp | 1317443 |
|---|
| Gene Length | 756 bp |
|---|
| Protein Length | 251 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 641616206 |
|---|
| Product | high-affinity zinc transporter ATPase |
|---|
| Protein accession | YP_001743386 |
|---|
| Protein GI | 170682668 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG1121] ABC-type Mn/Zn transport systems, ATPase component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.0117105 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 58 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACAAGTC TGGTTTCCCT GGAAAATGTC TCGGTTTCTT TTGGCCAACG CCGCGTCCTC
TCTGATGTGT CGCTGGAACT TAAACCTGGA AAAATTTTGA CTTTACTTGG GCCAAATGGC
GCAGGTAAGT CGACACTGGT ACGGGTAGTG CTCGGGCTGG TAACACCCGA TGAAGGGGTT
ATCAAGCGCA ACGGAAAACT ACGCATCGGC TATGTACCGC AGAAGCTGTA TCTCGACACC
ACGTTGCCAC TGACCGTAAA CCGTTTTTTA CGCTTACGAC CTGGCACACA TAAAGAAGAT
ATTTTGCCTG CACTGAAACG TGTCCAGGCC GGACACCTGA TTAACGCACC GATGCAAAAG
CTCTCGGGTG GCGAAACGCA GCGTGTACTG TTAGCGCGAG CATTGTTAAA TCGACCGCAA
TTATTAGTGC TGGATGAACC CACTCAGGGC GTGGATGTGA ATGGTCAGGT GGCGTTATAT
GACCTTATTG ACCAACTGCG TCGCGAACTG GATTGTGGCG TTTTAATGGT ATCTCACGAT
CTGCATCTGG TAATGGCAAA AACCGATGAA GTGCTTTGCC TGAATCACCA CATTTGTTGT
TCCGGCACAC CGGAAGTTGT TTCCCTGCAT CCGGAGTTTA TTTCTATGTT TGGTCCTCGT
GGTGCTGAAC AACTGGGTAT CTATCGCCAT CATCATAATC ATCGTCACGA TTTACAGGGA
CGAATTGTCT TGCGTCGGGG AAATGATCGC TCATGA
|
|---|
| Protein sequence | MTSLVSLENV SVSFGQRRVL SDVSLELKPG KILTLLGPNG AGKSTLVRVV LGLVTPDEGV
IKRNGKLRIG YVPQKLYLDT TLPLTVNRFL RLRPGTHKED ILPALKRVQA GHLINAPMQK
LSGGETQRVL LARALLNRPQ LLVLDEPTQG VDVNGQVALY DLIDQLRREL DCGVLMVSHD
LHLVMAKTDE VLCLNHHICC SGTPEVVSLH PEFISMFGPR GAEQLGIYRH HHNHRHDLQG
RIVLRRGNDR S
|
|---|
| |