Gene EcSMS35_1327 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcSMS35_1327 
SymbolznuB 
ID6145703 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli SMS-3-5 
KingdomBacteria 
Replicon accessionNC_010498 
Strand
Start bp1315906 
End bp1316691 
Gene Length786 bp 
Protein Length261 aa 
Translation table11 
GC content52% 
IMG OID641616205 
Producthigh-affinity zinc transporter membrane component 
Protein accessionYP_001743385 
Protein GI170679836 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1108] ABC-type Mn2+/Zn2+ transport systems, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.0274583 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones58 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTGAAT TATTATTTCC TGGTTGGTTA GCCGGGATCA TGCTCGCCTG TGCCGCGGGT 
CCGCTGGGTT CGTTTGTAGT CTGGCGTCGT ATGTCTTATT TCGGTGATAC GCTGGCTCAT
GCCTCATTAC TTGGCGTCGC GTTTGGTTTG TTGCTGGACG TGAATCCATT CTATGCGGTG
ATTGCCGTTA CGCTGCTGCT GGCGGGCGGT CTGGTATGGC TGGAGAAGCG TCCACAGCTG
GCGATCGACA CGTTATTAGG GATTATGGCG CACAGTGCCC TGTCGCTGGG CCTGGTGGTC
GTTAGTCTGA TGTCTAACAT TCGTGTTGAT TTGATGGCTT ACCTGTTCGG TGATTTGCTG
GCAGTGACGC CAGAAGATCT CATCTCTATT GCGATTGGCG TGGTCATCGT GGTGGCGATT
CTGTTCTGGC AATGGCGCAA TTTGCTGTCA ATGACGATTA GCCCGGATCT GGCGTTTGTT
GATGGTGTGA AATTACAGCG CGTGAAATTG TTGTTGATGC TGGTGACGGC ATTGACGATT
GGTGTAGCGA TGAAATTTGT CGGCGCGTTG ATTATTACTT CGTTGCTGAT TATTCCTGCT
GCTACAGCGC GTCGCTTTGC CCGCACGCCG GAACAGATGG CCGGTGTCGC TGTTTTGGTG
GGAATGGTGG CAGTAACTGG CGGTTTAACC TTTTCCGCAT TTTACGATAC GCCGGCGGGT
CCGTCGGTAG TGCTATGTGC GGCACTGTTA TTTATTATCA GTATGATGAA AAAGCAGGCC
AGCTAA
 
Protein sequence
MIELLFPGWL AGIMLACAAG PLGSFVVWRR MSYFGDTLAH ASLLGVAFGL LLDVNPFYAV 
IAVTLLLAGG LVWLEKRPQL AIDTLLGIMA HSALSLGLVV VSLMSNIRVD LMAYLFGDLL
AVTPEDLISI AIGVVIVVAI LFWQWRNLLS MTISPDLAFV DGVKLQRVKL LLMLVTALTI
GVAMKFVGAL IITSLLIIPA ATARRFARTP EQMAGVAVLV GMVAVTGGLT FSAFYDTPAG
PSVVLCAALL FIISMMKKQA S