Gene EcSMS35_1322 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcSMS35_1322 
Symbol 
ID6146759 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli SMS-3-5 
KingdomBacteria 
Replicon accessionNC_010498 
Strand
Start bp1311954 
End bp1312694 
Gene Length741 bp 
Protein Length246 aa 
Translation table11 
GC content52% 
IMG OID641616200 
Producthypothetical protein 
Protein accessionYP_001743380 
Protein GI170683235 
COG category[S] Function unknown 
COG ID[COG0217] Uncharacterized conserved protein 
TIGRFAM ID[TIGR01033] DNA-binding regulatory protein, YebC/PmpR family 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones58 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAGGTC ATAGTAAATG GGCCAACACC AGACATCGTA AAGCTGCGCA GGATGCTAAG 
CGCGGTAAAA TCTTCACTAA AATCATTCGT GAGCTGGTAA CCGCGGCTAA GCTGGGCGGT
GGTGATCCGG ACGCTAACCC GCGTTTGCGT GCAGCAATTG ATAAAGCACT GTCTAACAAC
ATGACCCGTG ACACTCTGAA CCGCGCAATT GCACGAGGTG TGGGTGGTGA TGATGATGCA
AACATGGAAA CCATCATCTA CGAAGGTTAC GGTCCTGGCG GCACGGCAAT CATGATTGAA
TGTCTGTCTG ACAACCGCAA CCGTACCGTT GCTGAAGTGC GTCATGCATT CAGCAAATGT
GGCGGTAACC TCGGTACTGA TGGTTCCGTA GCTTATCTGT TCAGCAAAAA AGGCGTGATC
TCCTTCGAGA AAGGCGATGA AGACACCATC ATGGAAGCAG CCCTGGAAGC CGGTGCTGAA
GACGTTGTGA CCTATGATGA CGGCGCGATT GATGTCTACA CTGCATGGGA AGAAATGGGC
AAAGTACGCG ACGCTCTGGA AGCGGCAGGT CTGAAAGCAG ACAGCGCGGA AGTTTCCATG
ATCCCGTCCA CCAAAGCTGA TATGGATGCA GAAACCGCAC CGAAACTGAT GCGTCTGATC
GATATGCTGG AAGATTGCGA CGACGTGCAG GAAGTTTACC ATAACGGTGA AATCTCTGAT
GAGGTTGCAG CGACTCTCTG A
 
Protein sequence
MAGHSKWANT RHRKAAQDAK RGKIFTKIIR ELVTAAKLGG GDPDANPRLR AAIDKALSNN 
MTRDTLNRAI ARGVGGDDDA NMETIIYEGY GPGGTAIMIE CLSDNRNRTV AEVRHAFSKC
GGNLGTDGSV AYLFSKKGVI SFEKGDEDTI MEAALEAGAE DVVTYDDGAI DVYTAWEEMG
KVRDALEAAG LKADSAEVSM IPSTKADMDA ETAPKLMRLI DMLEDCDDVQ EVYHNGEISD
EVAATL