Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcSMS35_1322 |
Symbol | |
ID | 6146759 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli SMS-3-5 |
Kingdom | Bacteria |
Replicon accession | NC_010498 |
Strand | + |
Start bp | 1311954 |
End bp | 1312694 |
Gene Length | 741 bp |
Protein Length | 246 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 641616200 |
Product | hypothetical protein |
Protein accession | YP_001743380 |
Protein GI | 170683235 |
COG category | [S] Function unknown |
COG ID | [COG0217] Uncharacterized conserved protein |
TIGRFAM ID | [TIGR01033] DNA-binding regulatory protein, YebC/PmpR family |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 58 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCAGGTC ATAGTAAATG GGCCAACACC AGACATCGTA AAGCTGCGCA GGATGCTAAG CGCGGTAAAA TCTTCACTAA AATCATTCGT GAGCTGGTAA CCGCGGCTAA GCTGGGCGGT GGTGATCCGG ACGCTAACCC GCGTTTGCGT GCAGCAATTG ATAAAGCACT GTCTAACAAC ATGACCCGTG ACACTCTGAA CCGCGCAATT GCACGAGGTG TGGGTGGTGA TGATGATGCA AACATGGAAA CCATCATCTA CGAAGGTTAC GGTCCTGGCG GCACGGCAAT CATGATTGAA TGTCTGTCTG ACAACCGCAA CCGTACCGTT GCTGAAGTGC GTCATGCATT CAGCAAATGT GGCGGTAACC TCGGTACTGA TGGTTCCGTA GCTTATCTGT TCAGCAAAAA AGGCGTGATC TCCTTCGAGA AAGGCGATGA AGACACCATC ATGGAAGCAG CCCTGGAAGC CGGTGCTGAA GACGTTGTGA CCTATGATGA CGGCGCGATT GATGTCTACA CTGCATGGGA AGAAATGGGC AAAGTACGCG ACGCTCTGGA AGCGGCAGGT CTGAAAGCAG ACAGCGCGGA AGTTTCCATG ATCCCGTCCA CCAAAGCTGA TATGGATGCA GAAACCGCAC CGAAACTGAT GCGTCTGATC GATATGCTGG AAGATTGCGA CGACGTGCAG GAAGTTTACC ATAACGGTGA AATCTCTGAT GAGGTTGCAG CGACTCTCTG A
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Protein sequence | MAGHSKWANT RHRKAAQDAK RGKIFTKIIR ELVTAAKLGG GDPDANPRLR AAIDKALSNN MTRDTLNRAI ARGVGGDDDA NMETIIYEGY GPGGTAIMIE CLSDNRNRTV AEVRHAFSKC GGNLGTDGSV AYLFSKKGVI SFEKGDEDTI MEAALEAGAE DVVTYDDGAI DVYTAWEEMG KVRDALEAAG LKADSAEVSM IPSTKADMDA ETAPKLMRLI DMLEDCDDVQ EVYHNGEISD EVAATL
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