Gene EcSMS35_1321 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcSMS35_1321 
SymbolntpA 
ID6146410 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli SMS-3-5 
KingdomBacteria 
Replicon accessionNC_010498 
Strand
Start bp1311482 
End bp1311925 
Gene Length444 bp 
Protein Length147 aa 
Translation table11 
GC content53% 
IMG OID641616199 
ProductdATP pyrophosphohydrolase 
Protein accessionYP_001743379 
Protein GI170682556 
COG category[L] Replication, recombination and repair
[R] General function prediction only 
COG ID[COG0494] NTP pyrophosphohydrolases including oxidative damage repair enzymes 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.832088 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones57 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTTATA AGCGTCCCGT TTCGATCTTA GTGGTCATCT ATGCACAAGA TACGAAACGG 
GTGCTGATGT TGCAGCGGCG TGACGATCCC GATTTCTGGC AGTCGGTAAC CGGCAGCGTG
GAAGAGGGTG AAACCGCGCC GCAAGCTGCC ATGCGCGAAG TAAAGGAAGA GGTCACCATC
GATGTTGTCG CTGAACAACT GACCTTAATT GACTGTCAGC GCACGGTAGA ATTTGAAATT
TTTTCACATT TACGTCATCG CTATGCGCCG GGCGTGACGC GTAATACGGA ATCATGGTTC
TGTCTTGCGC TTCCGCACGA ACGCCAGGTC GTCTTCACTG AACATCTGGC CTACAAGTGG
CTTGATGCGC ATGCTGCGGC GGCGCTCACT AAGTCCTGGA GCAACCGGCA GGCGATTGAA
CAGTTTGTAA TTAACGCTGC CTGA
 
Protein sequence
MAYKRPVSIL VVIYAQDTKR VLMLQRRDDP DFWQSVTGSV EEGETAPQAA MREVKEEVTI 
DVVAEQLTLI DCQRTVEFEI FSHLRHRYAP GVTRNTESWF CLALPHERQV VFTEHLAYKW
LDAHAAAALT KSWSNRQAIE QFVINAA