Gene EcSMS35_1318 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcSMS35_1318 
Symbol 
ID6144243 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli SMS-3-5 
KingdomBacteria 
Replicon accessionNC_010498 
Strand
Start bp1308017 
End bp1308835 
Gene Length819 bp 
Protein Length272 aa 
Translation table11 
GC content51% 
IMG OID641616196 
Producthypothetical protein 
Protein accessionYP_001743376 
Protein GI170681050 
COG category[S] Function unknown 
COG ID[COG1801] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones52 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTTACA TCGGTCTGCC GCAATGGTCA CATCCTAAAT GGGTGCGGTT GGGGATCACC 
AGCCTTGAAG AGTATGCCCG CCACTTTAAC TGTGTGGAGG GTAACACCAC GCTTTATGCC
CTGCCGAAAC CCGAGGTTGT CCTGCGCTGG CGTGAGCAGA CCACAGATGA CTTCCGCTTC
TGTTTTAAGT TTCCGGCGAC CATTTCGCAT CAGGCAACAT TACGGCATTG CGATGATTTA
GTGACTGAAT TTTTGACCCG CATGTCACCG TTGGCTCCGC GCATTGGACA ATACTGGCTG
CAACTGCCTG CCACATTCGG CCCACGGGAG CTGCCTGCGC TTTGGCATTT TCTCGACTCT
CTTCCCGGCG AATTTAATTA TGGTGTGGAA GTCCGCCATC CACAGTTTTT CGCCAAAGGG
GAAGAGGAAC AAACGCTTAA TCGCGGTTTA CATCAGCGCG GCGTTAATCG GGTGATTTTA
GACAGCCGCC CGGTTCATGC CGCACGTCCA CACAGTGAAG CTATTCGCGA CGCTCAACGA
AAAAAACCTA AAGTTCCGGT ACATGCTGTA CTGACGGCGA CAAATCCGCT GATCCGTTTT
ATCGGTAGTG ATGATATGAC GCAAAACCGG GAATTATTTC AGGTCTGGTT ACAAAAATTA
GCGCAGTGGC ATCAGACCAC TACGCCTTAT CTTTTTTTAC ATACGCCAGA TATTGCCCAG
GCCCCGGAAC TGGTACATAC CCTGTGGGAA GACTTACGTA AAACGCTTCC AGAGATCGGA
GCAGTTCCGG CTATTCCACA GCAATCTTCT CTTTTCTGA
 
Protein sequence
MIYIGLPQWS HPKWVRLGIT SLEEYARHFN CVEGNTTLYA LPKPEVVLRW REQTTDDFRF 
CFKFPATISH QATLRHCDDL VTEFLTRMSP LAPRIGQYWL QLPATFGPRE LPALWHFLDS
LPGEFNYGVE VRHPQFFAKG EEEQTLNRGL HQRGVNRVIL DSRPVHAARP HSEAIRDAQR
KKPKVPVHAV LTATNPLIRF IGSDDMTQNR ELFQVWLQKL AQWHQTTTPY LFLHTPDIAQ
APELVHTLWE DLRKTLPEIG AVPAIPQQSS LF