Gene EcSMS35_1303 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcSMS35_1303 
SymbolcheZ 
ID6146716 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli SMS-3-5 
KingdomBacteria 
Replicon accessionNC_010498 
Strand
Start bp1291703 
End bp1292347 
Gene Length645 bp 
Protein Length214 aa 
Translation table11 
GC content54% 
IMG OID641616181 
Productchemotaxis regulator CheZ 
Protein accessionYP_001743361 
Protein GI170680812 
COG category[N] Cell motility
[T] Signal transduction mechanisms 
COG ID[COG3143] Chemotaxis protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones40 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value0.00238575 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGATGCAAC CATCAATCAA ACCTGCTGAC GAGCATTCAG CTGGCGATAT CATTGCGCGC 
ATCGGCAGCC TGACGCGTAT GCTGCGCGAC AGTTTGCGGG AGCTGGGGCT GGATCAGGCC
ATTGCCGAAG CGGCGGAAGC CATCCCCGAT GCGCGCGATC GTTTGTACTA TGTTGTGCAG
ATGACCGCCC AGGCTGCGGA GCGGGCGCTG AACAGTGTTG AGGCGTCACA ACCGCATCAG
GATCAAATGG AGAAATCAGC AAAAGCGTTA ACCCAACGTT GGGATGACTG GTTTGCCGAT
CCGATTGACC TTGCCGACGC CCGTGAACTG GTAACAGATA CGCGGCAATT TCTGGCAGAT
GTCCCCGCGC ATACCAGCTT TACTAACGCG CAACTGCTGG AAATCATGAT GGCGCAGGAT
TTTCAGGATC TCACCGGGCA GGTCATTAAG CGGATGATGG ATGTCATTCA GGAGATCGAA
CGTCAGTTGC TGATGGTGCT GTTGGAAAAC ATCCCGGAAC AGGAGTCGCG TCCAAAACGT
GAAAACCAGA GTTTGCTTAA TGGACCTCAG GTCGATACCA GCAAAGCCGG TGTGGTAGCC
AGTCAGGATC AGGTGGACGA TTTGTTGGAT AGTCTTGGAT TTTGA
 
Protein sequence
MMQPSIKPAD EHSAGDIIAR IGSLTRMLRD SLRELGLDQA IAEAAEAIPD ARDRLYYVVQ 
MTAQAAERAL NSVEASQPHQ DQMEKSAKAL TQRWDDWFAD PIDLADAREL VTDTRQFLAD
VPAHTSFTNA QLLEIMMAQD FQDLTGQVIK RMMDVIQEIE RQLLMVLLEN IPEQESRPKR
ENQSLLNGPQ VDTSKAGVVA SQDQVDDLLD SLGF