| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_1296 |
|---|
| Symbol | cheA |
|---|
| ID | 6143455 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli SMS-3-5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010498 |
|---|
| Strand | + |
|---|
| Start bp | 1283422 |
|---|
| End bp | 1285380 |
|---|
| Gene Length | 1959 bp |
|---|
| Protein Length | 652 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 641616174 |
|---|
| Product | chemotaxis protein CheA |
|---|
| Protein accession | YP_001743354 |
|---|
| Protein GI | 170683477 |
|---|
| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0643] Chemotaxis protein histidine kinase and related kinases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.182817 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 0.0000116445 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGGATATAA GCGATTTTTA TCAGACATTT TTTGATGAAG CGGACGAACT GTTGGCTGAC
ATGGAGCAGC ATCTGCTGGT TTTGCAGCCG GAAGCGCCAG ATGCCGAACA ATTGAATGCC
ATCTTTCGGG CTGCCCACTC GATCAAAGGA GGGGCAGGAA CTTTTGGCTT CAGCGTTTTG
CAGGAAACCA CGCATCTGAT GGAAAACCTG CTCGATGAAG CCAGACGAGG TGAGATGCAA
CTCAACACCG ACATTATCAA TCTGTTTTTG GAAACGAAGG ACATCATGCA AGAACAGCTC
GACGCTTATA AACAGTCGCA AGAGCCGGAT GCCGCCAGCT TCGATTATAT CTGCCAGGCC
TTGCGTCAAC TGGCATTAGA AGCGAAAGGC GAAACGCCAT CCGCAGTGAC CCGATTAAGT
GTGGTTGCCA AAAGTGAACC GCAAGATGAG CAGAGTCGCA GTCAGTCGCC GCGACGAATT
ATCCTTTCGC GCCTGAAGGC CGGGGAAGTC GACCTGCTGG AAGAAGAACT GGGACATCTG
ACAACGTTAA CTGACGTGGT GAAAGGGGCG GATTCGCTCT CGGCAATATT ACCGGGCGAC
ATTGCCGAAG ATGACATCAC AGCGGTACTC TGTTTTGTGA TTGAAGCCGA TCAGATTACT
TTTGAAACAG TAGAAGTCTC GCCAAAAATA TCCACCCCAC CAGTGCTTAA ACTGGCAGCC
GAACAAGCGC CAACCGGCCG CGTGGAGCGG GAAAAAACGA CGCGCAGCAA TGAATCCACC
AGCATCCGTG TAGCGGTAGA AAAGGTTGAT CAATTAATTA ACCTCGTCGG CGAGCTGGTC
ATCACCCAGT CCATGCTTGC CCAGCGCTCC AGTGAACTGG ACCCGGTTAA TCATGGTGAT
TTGATTACCA GCATGGGGCA GTTACAACGT AACGCTCGTG ATTTGCAAGA ATCAGTGATG
TCGATTCGTA TGATGCCGAT GGAATATGTC TTTAGTCGCT ATCCCCGGCT GGTGCGTGAT
CTGGCGGGAA AACTCGGCAA GCAGGTAGAA CTGACGCTGG TGGGCAGTTC TACTGAACTC
GACAAGAGCC TGATAGAACG CATTATCGAC CCGCTGACCC ACCTGGTACG CAATAGCCTC
GATCACGGTA TTGAACTGCC AGAAAAACGG CTCGCCGCAG GTAAAAACAG CGTCGGAAAT
TTAATTCTTT CTGCCGAACA TCAGGGCGGC AACATTTGCA TTGAAGTGAC CGACGATGGT
GCAGGGCTAA ACCGTGAGCG AATTCTGGCA AAAGCGGCCT CGCAAGGTTT GACTGTAAGC
GAAAACATGA GCGACGACGA AGTCGCGATG CTGATATTTG CACCTGGCTT CTCTACGGCA
GAGCAGGTCA CCGACGTCTC CGGGCGCGGC GTCGGCATGG ACGTCGTTAA ACGTAATATC
CAGGAGATGG GCGGTCATGT CGAAATCCAG TCGAAGCAGG GTACTGGCAC GACGATCCGC
ATTTTACTGC CGCTGACGCT GGCCATCCTC GACGGCATGT CCGTACGCGT TGCGGATGAA
GTTTTCATTC TGCCGCTGAA TGCTGTCATG GAATCACTGC AACCCCGTGA AGCCGATCTG
CATCCACTGG CAGGCGGCGA GCGGGTGCTG GAAGTGCGGG GTGAATATCT GCCCATCGTC
GAACTGTGGA AAGTGTTCAA CGTCGCGGGC GCGAAAACCG AAGCTACCCA GGGAATTGTG
GTGATCTTAC AAAGTGGCGG TCGCCGCTAC GCCTTGCTGG TGGATCAATT AATTGGTCAA
CACCAGGTTG TGGTTAAAAA CCTGGAAAGT AACTATCGCA AAGTCCCCGG CATTTCTGCT
GCGACCATTC TTGGCGACGG CAGCGTGGCA CTGATTGTTG ATGTCTCCGC CTTGCAGGCG
ATAAACCGCG AACAACGTAT GGCGAACACC GCCGCCTGA
|
|---|
| Protein sequence | MDISDFYQTF FDEADELLAD MEQHLLVLQP EAPDAEQLNA IFRAAHSIKG GAGTFGFSVL
QETTHLMENL LDEARRGEMQ LNTDIINLFL ETKDIMQEQL DAYKQSQEPD AASFDYICQA
LRQLALEAKG ETPSAVTRLS VVAKSEPQDE QSRSQSPRRI ILSRLKAGEV DLLEEELGHL
TTLTDVVKGA DSLSAILPGD IAEDDITAVL CFVIEADQIT FETVEVSPKI STPPVLKLAA
EQAPTGRVER EKTTRSNEST SIRVAVEKVD QLINLVGELV ITQSMLAQRS SELDPVNHGD
LITSMGQLQR NARDLQESVM SIRMMPMEYV FSRYPRLVRD LAGKLGKQVE LTLVGSSTEL
DKSLIERIID PLTHLVRNSL DHGIELPEKR LAAGKNSVGN LILSAEHQGG NICIEVTDDG
AGLNRERILA KAASQGLTVS ENMSDDEVAM LIFAPGFSTA EQVTDVSGRG VGMDVVKRNI
QEMGGHVEIQ SKQGTGTTIR ILLPLTLAIL DGMSVRVADE VFILPLNAVM ESLQPREADL
HPLAGGERVL EVRGEYLPIV ELWKVFNVAG AKTEATQGIV VILQSGGRRY ALLVDQLIGQ
HQVVVKNLES NYRKVPGISA ATILGDGSVA LIVDVSALQA INREQRMANT AA
|
|---|
| |