Gene EcSMS35_1294 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcSMS35_1294 
SymbolmotA 
ID6145901 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli SMS-3-5 
KingdomBacteria 
Replicon accessionNC_010498 
Strand
Start bp1281601 
End bp1282488 
Gene Length888 bp 
Protein Length295 aa 
Translation table11 
GC content51% 
IMG OID641616172 
Productflagellar motor protein MotA 
Protein accessionYP_001743352 
Protein GI170681052 
COG category[N] Cell motility 
COG ID[COG1291] Flagellar motor component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000681717 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.00000000786895 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
GTGCTTATCT TATTAGGTTA CCTGGTTGTT CTCGGTACAG TTTTCGGCGG TTATTTGATG 
ACCGGTGGAA GCCTTGGAGC ACTCTATCAA CCCGCTGAAC TGGTGATTAT TGCCGGTGCA
GGGATTGGGT CGTTTATCGT CGGCAATAAT GGCAAAGCGA TTAAAGGCAC GCTGAAGGCG
CTGCCGTTGC TGTTTCGTCG CTCCAAATAC ACCAAAGCAA TGTATATGGA TCTGCTGGCT
CTGCTTTATC GGTTGATGGC GAAATCGCGG CAGATGGGGA TGTTTTCGCT GGAACGTGAT
ATTGAAAATC CCCGTGAGAG CGAGATCTTC GCCAGCTACC CACGCATCCT CGCGGATAGC
GTCATGCTTG ATTTTATCGT CGATTATCTG CGTCTGATTA TCAGCGGTCA TATGAACACC
TTCGAAATCG AAGCCCTGAT GGATGAAGAG ATTGAGACGC ACGAAAGCGA GGCAGAAGTC
CCGGCGAACA GTCTGGCGCT GGTCGGGGAC TCACTTCCGG CGTTTGGTAT TGTCGCGGCT
GTAATGGGGG TCGTTCACGC GTTAGGTTCA GCCGATCGTC CTGCCGCCGA GCTGGGTGCG
CTTATCGCAC ATGCGATGGT GGGGACTTTC CTCGGCATTT TATTGGCTTA CGGATTTATT
TCCCCATTAG CGAGTGTTTT ACGTCAGAAA AGCGCCGAAA CCAGCAAAAT GATGCAGTGC
GTCAAAGTCA CTCTGCTTTC TAATCTGAAC GGTTACGCAC CGCCTATCGC CGTTGAGTTT
GGTCGCAAAA CGCTCTATTC CAGCGAACGT CCGTCGTTTA TTGAACTGGA AGAGCATGTG
CGTGCGGTGA AAAATCCGCA ACAACAGACG ACAACCGAGG AAGCATGA
 
Protein sequence
MLILLGYLVV LGTVFGGYLM TGGSLGALYQ PAELVIIAGA GIGSFIVGNN GKAIKGTLKA 
LPLLFRRSKY TKAMYMDLLA LLYRLMAKSR QMGMFSLERD IENPRESEIF ASYPRILADS
VMLDFIVDYL RLIISGHMNT FEIEALMDEE IETHESEAEV PANSLALVGD SLPAFGIVAA
VMGVVHALGS ADRPAAELGA LIAHAMVGTF LGILLAYGFI SPLASVLRQK SAETSKMMQC
VKVTLLSNLN GYAPPIAVEF GRKTLYSSER PSFIELEEHV RAVKNPQQQT TTEEA