| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_1265 |
|---|
| Symbol | yecC |
|---|
| ID | 6145551 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli SMS-3-5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010498 |
|---|
| Strand | + |
|---|
| Start bp | 1261703 |
|---|
| End bp | 1262455 |
|---|
| Gene Length | 753 bp |
|---|
| Protein Length | 250 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 641616143 |
|---|
| Product | putative amino-acid ABC transporter ATP-binding protein YecC |
|---|
| Protein accession | YP_001743326 |
|---|
| Protein GI | 170681735 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG1126] ABC-type polar amino acid transport system, ATPase component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.0153826 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 34 |
|---|
| Fosmid unclonability p-value | 0.0123229 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGTGCCA TTGAAGTTAA GAACCTGGTG AAAAAATTTC ACGGTCAGAC GGTGCTGCAC
GGTATCGACC TTGAGGTAAA GCCTGGCGAA GTTGTGGCAA TTATCGGTCC GAGTGGTTCC
GGCAAAACCA CGTTGCTACG CAGCATAAAT CTGCTGGAAC AACCGGAAGC GGGAACTATC
ACCGTTGGCG ATATCACTAT TGATACTGCA CGTTCATTAA GTCAGCAAAA ATCGCTGATT
CGCCAGTTGC GTCAGCACGT CGGGTTTGTC TTCCAGAACT TTAATTTGTT TCCGCATCGT
ACGGTACTGG AAAACATTAT TGAAGGGCCG GTGATCGTCA AAGGCGAACC GAAAGAAGAG
GCCACGGAGC GCGCTCGCGA GCTACTGGCG AAAGTTGGGC TGGCCGGTAA AGAAACCAGC
TATCCACGTC GTTTGTCTGG CGGTCAACAG CAGCGTGTTG CGATTGCGCG TGCACTGGCA
ATGCGTCCTG AGGTGATTTT GTTTGACGAG CCAACGTCGG CGCTGGATCC AGAGCTGGTG
GGCGAAGTCC TGAACACCAT CCGTCAGCTG GCACAGGAAA AGCGCACGAT GGTGATTGTG
ACGCACGAAA TGAGCTTTGC CCGGGATGTT GCGGACCGGG CGATTTTTAT GGACCAGGGG
CGGATAGTCG AGCAGGGGGC CGCAAAAGCG TTATTTGCCG ATCCCAAGCA GCCTCGCACC
CGCCAGTTCC TCGAGAAGTT TCTGCTGCAA TAA
|
|---|
| Protein sequence | MSAIEVKNLV KKFHGQTVLH GIDLEVKPGE VVAIIGPSGS GKTTLLRSIN LLEQPEAGTI
TVGDITIDTA RSLSQQKSLI RQLRQHVGFV FQNFNLFPHR TVLENIIEGP VIVKGEPKEE
ATERARELLA KVGLAGKETS YPRRLSGGQQ QRVAIARALA MRPEVILFDE PTSALDPELV
GEVLNTIRQL AQEKRTMVIV THEMSFARDV ADRAIFMDQG RIVEQGAAKA LFADPKQPRT
RQFLEKFLLQ
|
|---|
| |