| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_1263 |
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| Symbol | dcyD |
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| ID | 6144001 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli SMS-3-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010498 |
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| Strand | + |
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| Start bp | 1260037 |
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| End bp | 1261023 |
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| Gene Length | 987 bp |
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| Protein Length | 328 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 641616141 |
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| Product | D-cysteine desulfhydrase |
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| Protein accession | YP_001743324 |
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| Protein GI | 170683740 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2515] 1-aminocyclopropane-1-carboxylate deaminase |
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| TIGRFAM ID | [TIGR01275] pyridoxal phosphate-dependent enzymes, D-cysteine desulfhydrase family |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.0547515 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 0.0193238 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCACTGC ATAATTTAAC CCGTTTTCCA CGGTTGGAGT TTATCGGCGC GCCAACACCG
CTCGAATATC TGCCGCGCTT TTCTGATTAT CTTGGACGGG AAATTTTCAT CAAACGGGAT
GACGTCACCC CCATGGCAAT GGGCGGCAAT AAATTACGTA AGCTGGAATT TCTCGCAGCA
GATGCTCTGC GCGAAGGTGC CGATACGCTG ATTACTGCCG GCGCGATCCA GTCTAACCAT
GTGCGCCAGA CTGCCGCAGT TGCGGCGAAA CTCGGTCTGC ACTGCGTGGC GCTGCTGGAA
AATCCTATTG GCACAACCGC AGAAAACTAT TTAACCAACG GCAATCGTTT GTTGCTGGAT
CTGTTCAATA CCCAGATTGA AATGTGTGAC GCACTGACCG ATCCCAATGC CCAACTGGAA
GAGCTGGCGA CGCGAGTCGA AGCACAAGGC TTTCGCCCGT ATGTCATTCC GGTTGGCGGT
TCTAATGCTC TGGGCGCGCT GGGTTATGTG GAGAGTGCGC TGGAAATCGC GCAACAGTGT
GAAGGGGCGG TTAATATTTC GTCGGTGGTA GTCGCATCGG GCAGTGCCGG AACTCACGCC
GGACTGGCTG TTGGGCTGGA ACACCTTATG CCTGAAAGCG AACTGATTGG CGTTACCGTG
TCGCGTTCCG TTGCCGATCA ATTGCCGAAA GTGGTTAACC TACAACAGGC GATTGCGAAA
GAACTGGAGC TGACCGCATC AGCGGAAATT TTACTCTGGG ATGACTATTT TGCACCTGGC
TACGGCGTGC CGAACGATGA AGGCATGGAA GCAGTGAAAT TGCTGGCGCG GCTGGAAGGC
ATTCTGCTTG ATCCTGTGTA TACCGGAAAA GCGATGGCGG GGCTGATTGA CGGTATCAGT
CAGAAACGCT TCAAAGATGA AGGGCCGATT CTGTTTATTC ATACCGGCGG CGCGCCTGCG
CTGTTCGCCT ATCATCCCCA CGTTTAG
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| Protein sequence | MPLHNLTRFP RLEFIGAPTP LEYLPRFSDY LGREIFIKRD DVTPMAMGGN KLRKLEFLAA
DALREGADTL ITAGAIQSNH VRQTAAVAAK LGLHCVALLE NPIGTTAENY LTNGNRLLLD
LFNTQIEMCD ALTDPNAQLE ELATRVEAQG FRPYVIPVGG SNALGALGYV ESALEIAQQC
EGAVNISSVV VASGSAGTHA GLAVGLEHLM PESELIGVTV SRSVADQLPK VVNLQQAIAK
ELELTASAEI LLWDDYFAPG YGVPNDEGME AVKLLARLEG ILLDPVYTGK AMAGLIDGIS
QKRFKDEGPI LFIHTGGAPA LFAYHPHV
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