| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_1248 |
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| Symbol | |
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| ID | 6146726 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli SMS-3-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010498 |
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| Strand | + |
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| Start bp | 1247021 |
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| End bp | 1248160 |
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| Gene Length | 1140 bp |
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| Protein Length | 379 aa |
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| Translation table | 11 |
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| GC content | 35% |
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| IMG OID | 641616126 |
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| Product | hypothetical protein |
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| Protein accession | YP_001743309 |
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| Protein GI | 170684152 |
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| COG category | [S] Function unknown |
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| COG ID | [COG4886] Leucine-rich repeat (LRR) protein |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.48386 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 47 |
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| Fosmid unclonability p-value | 0.670053 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTTCCAT TAAATGATCT TTCGTTAAAA ACTCAGTCGG TTCAATTAAA TAAAGTCACA
TCTAATACTG AATCTACGAT AAAACAACAC GAGTTAGTAT CTGATGATGC AATCATAAAT
GAATTATCAA GTGAGTTAGT CAGTTGTCTT GGAAATGGTA AGCTTACACC AATTAGTGAA
GACAGCAACT TACTGAATAT GCTGTCTGAA TTTAAGTTAT TGAGAGAGCA ATGTTTCAGG
TGGGGTAATT ATACTCTATT GTTTGAAAAT TATGGGGCTT ATGATAAGAC GGGATCTATC
ACGATAGAAA AAAGTCAGGG GGAGGGGACT TTACCCATTC GGCATAAATT AGAGTTTATA
TCGACTAATA TTGCAGAGTT GCTGGACAAG TTAACCAAAA TTACAGATGC CAGACTTTGC
AAAGGTTTCA GTGACTGGGC TAGTTCAGTC AAAGAAGGCG CATCGAATGA CTTGAAAGAA
AATGTGGATA GAGCATTGGT GAGAATGTTT AAATGTGTTA AGCTCCACAG TAATGAACTT
AACTTATCAT ACCTTTTTTT GGGTTCTGTG CCGCCTCTTC CAGAGTGGAT TGAAATGCTT
AGCCTTATTC ATAATAAACT TGATTCAATA CAGGTGCCCG AATCATGCAA AGAATTAGAA
CTCGATTTCA ATAACCTTAC AGAATTTCCA CAAGTACCTG ATGGAATTAC CCTGATCTCC
GTAAATAATA ACCTGATATC GCATATTGAC TCATTTCCGC CAAAGGTTAA GAAAATTTTT
ATTGGTCACA ATAAGCTATC GGAAATACCA GCAATACCAG ACACCGCTAA GGTTTTTGAT
TGTAGTGAGA ATAATATAAA AGAAATTAGG TGGTTCCCCA AAAATCTGAA AGAAGTGCAT
ATTGAATATA ATAAGATTGA GGTTATTCCT GCGATACCTG GCAATTTAAA ATTACTTTTT
ATGGAATGTA ATCCTATTAA AGAGGCATTT TTAATGCCAT GGACTCTGAC AGGGATTTGC
TATGAAATAT CGCAGCGGAA ATATATTGTT ACGAACCCCG ATGATTATGA TAAATATTCC
GATATGGTTA AAAAGCATGT AATAGATGGT GAGGAATTCA TAATTAAATA TTATATGTAA
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| Protein sequence | MFPLNDLSLK TQSVQLNKVT SNTESTIKQH ELVSDDAIIN ELSSELVSCL GNGKLTPISE
DSNLLNMLSE FKLLREQCFR WGNYTLLFEN YGAYDKTGSI TIEKSQGEGT LPIRHKLEFI
STNIAELLDK LTKITDARLC KGFSDWASSV KEGASNDLKE NVDRALVRMF KCVKLHSNEL
NLSYLFLGSV PPLPEWIEML SLIHNKLDSI QVPESCKELE LDFNNLTEFP QVPDGITLIS
VNNNLISHID SFPPKVKKIF IGHNKLSEIP AIPDTAKVFD CSENNIKEIR WFPKNLKEVH
IEYNKIEVIP AIPGNLKLLF MECNPIKEAF LMPWTLTGIC YEISQRKYIV TNPDDYDKYS
DMVKKHVIDG EEFIIKYYM
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