| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_1238 |
|---|
| Symbol | fliN |
|---|
| ID | 6147142 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli SMS-3-5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010498 |
|---|
| Strand | - |
|---|
| Start bp | 1237869 |
|---|
| End bp | 1238282 |
|---|
| Gene Length | 414 bp |
|---|
| Protein Length | 137 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 641616116 |
|---|
| Product | flagellar motor switch protein FliN |
|---|
| Protein accession | YP_001743299 |
|---|
| Protein GI | 170683738 |
|---|
| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG1886] Flagellar motor switch/type III secretory pathway protein |
|---|
| TIGRFAM ID | [TIGR02480] flagellar motor switch protein FliN |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.133965 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 59 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGTGACA TGAATAATCC GGCCGATGAC AACAACGGCG CAATGGACGA TCTGTGGGCT
GAAGCGTTGA GCGAACAAAA ATCAACCAAC AGCAAAAGCG CTGCCGACGC GGTGTTCCAG
CAATTTGGCG GTGGTGATGT CAGCGGAACG TTGCAGGATA TCGACCTGAT TATGGATATT
CCGGTCAAGC TGACCGTCGA GCTGGGCCGT ACGCGGATGA CCATCAAAGA GCTGTTGCGT
CTGACGCAAG GGTCCGTCGT GGCGCTGGAC GGTCTGGCGG GCGAACCACT GGATATTCTG
ATCAACGGTT ATTTAATCGC CCAGGGCGAA GTTGTCGTAG TCGCTGATAA ATATGGCGTG
CGGATCACCG ATATTATTAC CCCGTCTGAG CGAATGCGTC GCCTGAGCCG TTAG
|
|---|
| Protein sequence | MSDMNNPADD NNGAMDDLWA EALSEQKSTN SKSAADAVFQ QFGGGDVSGT LQDIDLIMDI
PVKLTVELGR TRMTIKELLR LTQGSVVALD GLAGEPLDIL INGYLIAQGE VVVVADKYGV
RITDIITPSE RMRRLSR
|
|---|
| |