Gene EcSMS35_1236 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcSMS35_1236 
SymbolfliP 
ID6145718 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli SMS-3-5 
KingdomBacteria 
Replicon accessionNC_010498 
Strand
Start bp1236764 
End bp1237501 
Gene Length738 bp 
Protein Length245 aa 
Translation table11 
GC content53% 
IMG OID641616114 
Productflagellar biosynthesis protein FliP 
Protein accessionYP_001743297 
Protein GI170682430 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG1338] Flagellar biosynthesis pathway, component FliP 
TIGRFAM ID[TIGR01103] flagellar biosynthetic protein FliP 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00259503 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones58 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTCGTT TATTGTCTGT CGCACCTGTC CTTCTCTGGC TGATTACGCC CCTCGCCTTC 
GCGCAACTAC CGGGTATCAC CAGCCAGCCG CTGCCTGGCG GTGGACAAAG CTGGTCGCTC
CCGGTGCAAA CGCTGGTGTT CATCACCTCG TTGACGTTTA TTCCGGCAAT TTTACTGATG
ATGACCAGTT TCACCCGCAT CATCATTGTT TTTGGTTTAT TGCGTAACGC GCTGGGAACA
CCCTCCGCGC CACCTAACCA GGTATTGCTG GGGCTGGCAC TGTTTTTGAC CTTTTTTATT
ATGTCACCGG TGATCGACAA AATTTATGTC GATGCGTACC AGCCATTCAG CGAAGAGAAA
ATATCAATGC AGGAGGCGCT GGAAAAAGGG GCGCAGCCGC TGCGTGAGTT TATGCTGCGT
CAGACCCGTG AGGCGGATTT AGGGTTGTTT GCCAGACTGG CGAATACCGG CCCGTTGCAG
GGACCTGAAG CCGTGCCGAT GCGCATTTTG CTCCCGGCCT ACGTGACCAG CGAGTTGAAA
ACCGCATTTC AGATAGGCTT CACGATTTTC ATCCCTTTTT TGATTATCGA CCTGGTGATA
GCCAGCGTGT TGATGGCATT AGGGATGATG ATGGTTCCCC CCGCCACCAT TGCTCTGCCC
TTTAAACTGA TGCTGTTTGT ACTGGTGGAT GGCTGGCAAT TGCTGGTCGG TTCGCTGGCG
CAGAGCTTTT ACAGCTAG
 
Protein sequence
MRRLLSVAPV LLWLITPLAF AQLPGITSQP LPGGGQSWSL PVQTLVFITS LTFIPAILLM 
MTSFTRIIIV FGLLRNALGT PSAPPNQVLL GLALFLTFFI MSPVIDKIYV DAYQPFSEEK
ISMQEALEKG AQPLREFMLR QTREADLGLF ARLANTGPLQ GPEAVPMRIL LPAYVTSELK
TAFQIGFTIF IPFLIIDLVI ASVLMALGMM MVPPATIALP FKLMLFVLVD GWQLLVGSLA
QSFYS