Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcSMS35_1236 |
Symbol | fliP |
ID | 6145718 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli SMS-3-5 |
Kingdom | Bacteria |
Replicon accession | NC_010498 |
Strand | - |
Start bp | 1236764 |
End bp | 1237501 |
Gene Length | 738 bp |
Protein Length | 245 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 641616114 |
Product | flagellar biosynthesis protein FliP |
Protein accession | YP_001743297 |
Protein GI | 170682430 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG1338] Flagellar biosynthesis pathway, component FliP |
TIGRFAM ID | [TIGR01103] flagellar biosynthetic protein FliP |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.00259503 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | 58 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCGTCGTT TATTGTCTGT CGCACCTGTC CTTCTCTGGC TGATTACGCC CCTCGCCTTC GCGCAACTAC CGGGTATCAC CAGCCAGCCG CTGCCTGGCG GTGGACAAAG CTGGTCGCTC CCGGTGCAAA CGCTGGTGTT CATCACCTCG TTGACGTTTA TTCCGGCAAT TTTACTGATG ATGACCAGTT TCACCCGCAT CATCATTGTT TTTGGTTTAT TGCGTAACGC GCTGGGAACA CCCTCCGCGC CACCTAACCA GGTATTGCTG GGGCTGGCAC TGTTTTTGAC CTTTTTTATT ATGTCACCGG TGATCGACAA AATTTATGTC GATGCGTACC AGCCATTCAG CGAAGAGAAA ATATCAATGC AGGAGGCGCT GGAAAAAGGG GCGCAGCCGC TGCGTGAGTT TATGCTGCGT CAGACCCGTG AGGCGGATTT AGGGTTGTTT GCCAGACTGG CGAATACCGG CCCGTTGCAG GGACCTGAAG CCGTGCCGAT GCGCATTTTG CTCCCGGCCT ACGTGACCAG CGAGTTGAAA ACCGCATTTC AGATAGGCTT CACGATTTTC ATCCCTTTTT TGATTATCGA CCTGGTGATA GCCAGCGTGT TGATGGCATT AGGGATGATG ATGGTTCCCC CCGCCACCAT TGCTCTGCCC TTTAAACTGA TGCTGTTTGT ACTGGTGGAT GGCTGGCAAT TGCTGGTCGG TTCGCTGGCG CAGAGCTTTT ACAGCTAG
|
Protein sequence | MRRLLSVAPV LLWLITPLAF AQLPGITSQP LPGGGQSWSL PVQTLVFITS LTFIPAILLM MTSFTRIIIV FGLLRNALGT PSAPPNQVLL GLALFLTFFI MSPVIDKIYV DAYQPFSEEK ISMQEALEKG AQPLREFMLR QTREADLGLF ARLANTGPLQ GPEAVPMRIL LPAYVTSELK TAFQIGFTIF IPFLIIDLVI ASVLMALGMM MVPPATIALP FKLMLFVLVD GWQLLVGSLA QSFYS
|
| |