Gene EcSMS35_1229 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcSMS35_1229 
Symbol 
ID6145054 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli SMS-3-5 
KingdomBacteria 
Replicon accessionNC_010498 
Strand
Start bp1233044 
End bp1233859 
Gene Length816 bp 
Protein Length271 aa 
Translation table11 
GC content53% 
IMG OID641616108 
Productmannosyl-3-phosphoglycerate phosphatase 
Protein accessionYP_001743291 
Protein GI170684226 
COG category[R] General function prediction only 
COG ID[COG3769] Predicted hydrolase (HAD superfamily) 
TIGRFAM ID[TIGR01484] HAD-superfamily hydrolase, subfamily IIB
[TIGR01486] mannosyl-3-phosphoglycerate phosphatase family
[TIGR02463] mannosyl-3-phosphoglycerate phosphatase-related protein 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000000280677 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones57 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTTTCAA TTCAACAACC ACTACTGGTT TTTAGCGATC TTGATGGCAC CCTGCTGGAC 
AGTCATAGTT ATGACTGGCA ACCGGCTGCC CCCTGGCTCA GCCGTTTACG CGAAGGGAAT
GTTCCCGTCA TTCTCTGTAG CAGTAAAACT TCAGCGGAAA TGCTGTACTT GCAAAAAACG
TTGGGGCTAC AAGGGTTACC GCTGATTGCC GAAAATGGCG CAGTGATCCA GCTTGCTGAA
CAATGGCAGG ATATAGACGG TTTTCCACGC ATCATCTCAG GTATTAGCCA TGGCGAAATC
AGCCAGGTTT TAAATACGCT ACGCGAGAAA GAACATTTTA AATTCACGAC TTTCGATGAT
GTCGACGATG CAACCATCGC CGAATGGACG GGATTAAGCC GTAGCCAGGC GGCGCTGACG
CAGCTGCATG AGGCGTCGGT AACGCTAATC TGGCGCGACA GTGACGAGCG TATGGCACAA
TTTACCGCTC GTCTGAACGA ACTGGGCTTA CAGTTTATGC AGGGTGCGCG CTTCTGGCAC
GTCCTGGATG CCTCTGCCGG AAAAGATCAG GCCGCCAACT GGATTATCGC GACCTATCAA
CAATTATCAG GCAAACGCCC AACCACACTT GGCCTGGGCG ATGGGCCAAA CGATGCGCCC
TTACTGGAGG TAATGGATTA CGCGGTGATT GTGAAAGGGC TAAACCGTGA AGGGGTGCAT
CTGCATGATG AGGATCCGAC CCGCGTCTGG CGAACGCAGC GTGAAGGACC GGAAGGCTGG
CGTGAAGGGC TGGACCATTT TTTCTCCGCT CGTTAA
 
Protein sequence
MFSIQQPLLV FSDLDGTLLD SHSYDWQPAA PWLSRLREGN VPVILCSSKT SAEMLYLQKT 
LGLQGLPLIA ENGAVIQLAE QWQDIDGFPR IISGISHGEI SQVLNTLREK EHFKFTTFDD
VDDATIAEWT GLSRSQAALT QLHEASVTLI WRDSDERMAQ FTARLNELGL QFMQGARFWH
VLDASAGKDQ AANWIIATYQ QLSGKRPTTL GLGDGPNDAP LLEVMDYAVI VKGLNREGVH
LHDEDPTRVW RTQREGPEGW REGLDHFFSA R