| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_1216 |
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| Symbol | |
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| ID | 6144508 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli SMS-3-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010498 |
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| Strand | + |
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| Start bp | 1220465 |
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| End bp | 1221247 |
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| Gene Length | 783 bp |
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| Protein Length | 260 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 641616094 |
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| Product | transcriptional regulatory protein YedW |
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| Protein accession | YP_001743277 |
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| Protein GI | 170680782 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
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| TIGRFAM ID | [TIGR01387] heavy metal response regulator |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.000000203871 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 45 |
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| Fosmid unclonability p-value | 0.637592 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAGTTTTG AGGATAGCGA AAAAACGTCC AGGGTAACCT TACAGCAGCA TTACAATTTT
GTAATGAACC AGGCTGTTTC TATAACATAT GATTTATGGC ATATTATTTT CATGAAGATT
TTACTTATTG AAGATAATCA AAGGACCCAG GAATGGGTAA CACAGGGGCT TTCCGAAGCG
GGTTATGTCA TTGATGCCGT TTCTGATGGC AGAGATGGGC TTTATCTTGC GTTGAAGGAT
GATTATGCAT TGATCATTCT GGATATTATG CTTCCGGGTA TGGATGGCTG GCAGATCTTA
CAAACGTTAA GAACAGCAAA GCAAACCCCT GTTATTTGCC TTACTGCAAG GGATTCTGTC
GATGACAGAG TCAGAGGGCT GGACAGTGGA GCAAATGATT ATCTGGTAAA ACCTTTTTCA
TTTTCTGAGT TGCTGGCAAG GGTTCGGGCA CAATTAAGGC AACATCACGC TTTGAATTCA
ACATTAGAAA TCAGTGGTTT AAGAATGGAC TCTGTTAGTC AAAGTGTGAG CAGGGACAAT
ATCAGTATTA CACTGACGCG CAAGGAGTTT CAGTTACTTT GGCTACTGGC CTCCAGAGCT
GGCGAAATTA TACCCAGAAC GGTTATTGCG AGTGAAATTT GGGGAATCAA CTTTGATAGT
GATACCAATA CGGTGGATGT CGCCATTCGC AGGCTCCGCG CAAAAGTTGA TGATCCTTTT
CCTGAAAAGC TAATCGCCAC AATCCGGGGG ATGGGCTATT CATTCGTAGC GGTAAAAAAA
TAA
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| Protein sequence | MSFEDSEKTS RVTLQQHYNF VMNQAVSITY DLWHIIFMKI LLIEDNQRTQ EWVTQGLSEA
GYVIDAVSDG RDGLYLALKD DYALIILDIM LPGMDGWQIL QTLRTAKQTP VICLTARDSV
DDRVRGLDSG ANDYLVKPFS FSELLARVRA QLRQHHALNS TLEISGLRMD SVSQSVSRDN
ISITLTRKEF QLLWLLASRA GEIIPRTVIA SEIWGINFDS DTNTVDVAIR RLRAKVDDPF
PEKLIATIRG MGYSFVAVKK
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