| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_1215 |
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| Symbol | |
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| ID | 6145347 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli SMS-3-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010498 |
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| Strand | - |
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| Start bp | 1220030 |
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| End bp | 1220443 |
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| Gene Length | 414 bp |
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| Protein Length | 137 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 641616093 |
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| Product | transthyretin family protein |
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| Protein accession | YP_001743276 |
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| Protein GI | 170680340 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2351] Transthyretin-like protein |
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| TIGRFAM ID | [TIGR02962] hydroxyisourate hydrolase |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.00000382431 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 45 |
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| Fosmid unclonability p-value | 0.571702 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTTAAAGC GTTATTTAGT ACTCTCCGTA GTAACGGCAG CATTTTCATT ACCTTCTTTG
GTTTATGCCG CACAACAAAA CATTCTTAGC GTGCACATTT TGAACCAGCA AACCGGAAAA
CCCGCTGCTG ACGTGACAGT CACTCTTGAA AAGAAGGCGG ATAACGGCTG GTTACAACTT
AATACCGCCA AAACAGATAA GGATGGACGA ATTAAGGCAC TGTGGCCCGA GCAAACTGCG
ACTACTGGCG ATTACCGTGT CGTATTTAAA ACCGGGGACT ATTTCAAGAA ACAAAATCTT
GAAAGTTTCT TCCCTGAGAT CCCCGTTGAA TTTCATATTA ATAAAGTGAA CGAGCATTAT
CATGTGCCTT TATTACTTAG CCAATATGGG TATTCAACCT ATCGTGGCAG TTAA
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| Protein sequence | MLKRYLVLSV VTAAFSLPSL VYAAQQNILS VHILNQQTGK PAADVTVTLE KKADNGWLQL
NTAKTDKDGR IKALWPEQTA TTGDYRVVFK TGDYFKKQNL ESFFPEIPVE FHINKVNEHY
HVPLLLSQYG YSTYRGS
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