Gene EcSMS35_1214 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcSMS35_1214 
Symbol 
ID6145897 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli SMS-3-5 
KingdomBacteria 
Replicon accessionNC_010498 
Strand
Start bp1218917 
End bp1219921 
Gene Length1005 bp 
Protein Length334 aa 
Translation table11 
GC content53% 
IMG OID641616092 
Productputative sulfite oxidase subunit YedY 
Protein accessionYP_001743275 
Protein GI170681163 
COG category[R] General function prediction only 
COG ID[COG2041] Sulfite oxidase and related enzymes 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000894438 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones45 
Fosmid unclonability p-value0.649922 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAAGA ATCAATTTTT AAAAGAATCA GATGTTACGG CCGAGTCGGT ATTCTTTATG 
AAGCGTCGAC AGGTGTTAAA AGCACTGGGC ATCAGCGCAG CTGCACTTTC TTTGCCTCAC
GCTGCGCATG CCGATCTGCT TAGCTGGTTT AAAGGGAACG ATCGCCCGCC CGCCCCCGCC
GGAAAACCGC TGGAGTTCAG CAAGCCTGCC GCCTGGCAAA ATAACCTGCC ACTGACGCCA
GTAGATAAAG TCTCCGGTTA TAACAACTTC TATGAATTCG GGCTGGATAA AGCCGATCCC
GCCGCTAATG CTGGTAGCCT GAAAACCGAT CCATGGACAC TGAAAATCAG CGGCGAAGTG
GCAAAACCAT TGACCCTCGA TCACGATGAT TTAACCCGTC GCTTCCCGCT GGAAGAGCGT
ATTTATCGTA TGCGCTGCGT GGAAGCGTGG TCGATGGTGG TGCCGTGGAT TGGTTTTCCG
CTGCACAAAT TGCTGGCGCT TGCCGAACCC ACCAGCAATG CGAAGTATGT CGCTTTCGAA
ACAATTTATG CACCGGAACA GATGCCTGGC CAGCAGGACC GCTTTATCGG CGGCGGGCTG
AAATATCCTT ATGTCGAAGG ATTGCGTCTC GACGAAGCAA TGCATCCGCT CACACTGATG
ACCGTGGGTG TTTATGGCAA GGCGTTACCG CCACAAAATG GCGCGCCGGT ACGACTGATT
GTGCCGTGGA AATATGGCTT TAAAGGGATT AAATCGATAG TCAGTATTAA GCTGACCCGC
GAGCGTCCGC CAACCACCTG GAATCTGGCA GCGCCTGACG AATACGGTTT TTACGCCAAC
GTTAATCCGC ATGTTGATCA CCCGCGCTGG TCACAGGCTA CCGAACGATT TATTGGTTCA
GGCGGCATCC TCGATGTTCA GCGCCAGCCA ACGCTACTGT TTAATGGTTA CGCCGACCAG
GTGGCATCGC TGTATCGTGG CCTGGATTTG CGGGAGAATT TCTGA
 
Protein sequence
MKKNQFLKES DVTAESVFFM KRRQVLKALG ISAAALSLPH AAHADLLSWF KGNDRPPAPA 
GKPLEFSKPA AWQNNLPLTP VDKVSGYNNF YEFGLDKADP AANAGSLKTD PWTLKISGEV
AKPLTLDHDD LTRRFPLEER IYRMRCVEAW SMVVPWIGFP LHKLLALAEP TSNAKYVAFE
TIYAPEQMPG QQDRFIGGGL KYPYVEGLRL DEAMHPLTLM TVGVYGKALP PQNGAPVRLI
VPWKYGFKGI KSIVSIKLTR ERPPTTWNLA APDEYGFYAN VNPHVDHPRW SQATERFIGS
GGILDVQRQP TLLFNGYADQ VASLYRGLDL RENF