| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_1213 |
|---|
| Symbol | |
|---|
| ID | 6144493 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli SMS-3-5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010498 |
|---|
| Strand | - |
|---|
| Start bp | 1218281 |
|---|
| End bp | 1218916 |
|---|
| Gene Length | 636 bp |
|---|
| Protein Length | 211 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 641616091 |
|---|
| Product | putative sulfite oxidase subunit YedZ |
|---|
| Protein accession | YP_001743274 |
|---|
| Protein GI | 170681710 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG2717] Predicted membrane protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.0027785 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 44 |
|---|
| Fosmid unclonability p-value | 0.48109 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGTCTGA CAGCAAAACA GGTGACATGG CTGAAAGTTA GCCTGCATCT TGCCGGATTG
TTGCCGTTTC TCTGGCTGGT CTGGGCGATC AATCACGGTG GACTGGGTGC CGATCCGGTG
AAAGATATTC AGCATTTTAC CGGTCGCACT GCACTGAAAT TTTTGCTGGC GACCTTGTTA
ATCACACCTC TGGCACGCTA CGTAAAACAG CCGTTATTGA TACGCACTCG CCGCCTGTTA
GGCTTATGGT GCTTTGCCTG GGCGACACTG CATTTAACCA GTTACGCATT GCTGGAGCTG
GGCGTGAATA ATCTGGCGTT ATTAGGTAAG GAGTTAATTA CCCGGCCTTA TTTAACGTTA
GGTATTATCA GCTGGGTTAT TTTGCTTGCT TTAGCGTTTA CTTCAACCCA GGCGATGCAG
CGAAAACTCG GCAAGCACTG GCAACAGTTG CATAATTTCG TCTATCTTGT CGCGATCCTG
GCCCCAATAC ATTATCTGTG GTCAGTGAAG ATTATTTCAC CGCAGCCGCT CATCTACGCT
GGGCTGGCTG TACTGCTTTT AGCCTTACGG TATAAGAAGT TGCGTTCCCT TTTTAACCGG
TTACGCAAGC AGGTTCACAA CAAATTATCT GTATAA
|
|---|
| Protein sequence | MRLTAKQVTW LKVSLHLAGL LPFLWLVWAI NHGGLGADPV KDIQHFTGRT ALKFLLATLL
ITPLARYVKQ PLLIRTRRLL GLWCFAWATL HLTSYALLEL GVNNLALLGK ELITRPYLTL
GIISWVILLA LAFTSTQAMQ RKLGKHWQQL HNFVYLVAIL APIHYLWSVK IISPQPLIYA
GLAVLLLALR YKKLRSLFNR LRKQVHNKLS V
|
|---|
| |