Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcSMS35_1212 |
Symbol | |
ID | 6142982 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli SMS-3-5 |
Kingdom | Bacteria |
Replicon accession | NC_010498 |
Strand | - |
Start bp | 1217374 |
End bp | 1218024 |
Gene Length | 651 bp |
Protein Length | 216 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 641616090 |
Product | hypothetical protein |
Protein accession | YP_001743273 |
Protein GI | 170680325 |
COG category | [R] General function prediction only |
COG ID | [COG3443] Predicted periplasmic or secreted protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.0315082 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 43 |
Fosmid unclonability p-value | 0.401918 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGGCGATTC GTCTTCACAA ACTGGCTGTT GCTTTAGGTG TCTTTATTGT TAGCGCTCCT GCCTTTTCGC ATGGTCATCA CTCACACGGC AAACCCTTAA CAGAGGTCGA ACAAAAAGCT GCTAATGGTG TTTTTGATGA TGCCAATGTA CAAAACCGAA CGCTCAGTGA CTGGGATGGA GTCTGGCAAT CCGTTTATCC TTTACTGCAA AGTGGCAAAC TTGACCCCGT CTTTCAGAAG AAAGCGGATG CAGATAAAAC TAAAACATTT GCTGAAATTA AAGATTATTA TCACAAAGGT TATGCAACAG ATATTGAGAT GATTGGCATT GAGGACGGCA TTGTTGAATT CCATAGAAAT AATGAAACAA CATCCTGTAA ATATGAGTAC GATGGATACA AAATACTCAC CTATAAATCA GGCAAGAAAG GCGTTCGTTA CTTATTCGAA TGTAAAGATC CTGAAAGCAA AGCCCCTAAA TATATACAAT TTAGCGATCA TATAATTGCA CCACGAAAAT CATCTCATTT TCACATTTTT ATGGGTAATG ATTCACAGCA ATCTTTATTA AATGAAATGG AAAACTGGCC AACGTATTAT CCATATCAGT TGAGTAGCGA AGAAGTGGTC GAGGAAATGA TGTCTCATTG A
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Protein sequence | MAIRLHKLAV ALGVFIVSAP AFSHGHHSHG KPLTEVEQKA ANGVFDDANV QNRTLSDWDG VWQSVYPLLQ SGKLDPVFQK KADADKTKTF AEIKDYYHKG YATDIEMIGI EDGIVEFHRN NETTSCKYEY DGYKILTYKS GKKGVRYLFE CKDPESKAPK YIQFSDHIIA PRKSSHFHIF MGNDSQQSLL NEMENWPTYY PYQLSSEEVV EEMMSH
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