| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_1202 |
|---|
| Symbol | |
|---|
| ID | 6143925 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli SMS-3-5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010498 |
|---|
| Strand | + |
|---|
| Start bp | 1205226 |
|---|
| End bp | 1205873 |
|---|
| Gene Length | 648 bp |
|---|
| Protein Length | 215 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 641616080 |
|---|
| Product | bacteriophage lambda tail assembly protein I |
|---|
| Protein accession | YP_001743263 |
|---|
| Protein GI | 170681407 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG4723] Phage-related protein, tail component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 30 |
|---|
| Fosmid unclonability p-value | 0.00399274 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGGCAGCGA CGCACACACT CCCTCTGGCG TCACCGGGCA TGGCACGCAT CTGCCTTTAC
GGGAATTTAC AACGATTTGG CCGCCGCATC GACCTTCGTG TGAAAACGGG GGCCGAAGCC
ATCCGGGCGC TGGCCATGCA GATCCCGGCG TTTCGTCAGA AACTGAGTGA CGGCTGGTAT
CAGGTACGGA TTGCCGGGCG TGATGCAGGT GAAACCGAAT TGTCTGCCCG TCTTAATGAG
CCGCTGGCAA ATGGTGCCGT GATCCACATC GTTCCGCGTC TGGAGGGGGC CAAAAGTGGC
GGTGTGTTTC AGGCGGTGCT GGGTGCGGCG CTGATTGCGG TGGCATGGTG GAACCCTGTA
GGCTGGCTGG GGGCCGCGGC TGTATCGGGT ATGTATGCAG CAGGGGCCAG TATGATCCTG
GGTGGTGTGG CGCAGATGCT GGCACCGAAA GCCCGGACGC CCACGGCAGC CAGTACAGAT
AACGGCAAAC AGAACACGTA TTTCTCGTCA CTGGATAACA TGGTTGCCCA GGGCAATGTT
CTGCCCGTTC TGTACGGTGA AATGCGTGTG GGGTCGCGGG TGGTATCTCA GGAGATCAGC
ACGGCAGATG AAGGTGATGG TGGTCAGGTT GTGGTGATTG GTCGCTGA
|
|---|
| Protein sequence | MAATHTLPLA SPGMARICLY GNLQRFGRRI DLRVKTGAEA IRALAMQIPA FRQKLSDGWY
QVRIAGRDAG ETELSARLNE PLANGAVIHI VPRLEGAKSG GVFQAVLGAA LIAVAWWNPV
GWLGAAAVSG MYAAGASMIL GGVAQMLAPK ARTPTAASTD NGKQNTYFSS LDNMVAQGNV
LPVLYGEMRV GSRVVSQEIS TADEGDGGQV VVIGR
|
|---|
| |