Gene EcSMS35_1201 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcSMS35_1201 
Symbol 
ID6147022 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli SMS-3-5 
KingdomBacteria 
Replicon accessionNC_010498 
Strand
Start bp1204585 
End bp1205328 
Gene Length744 bp 
Protein Length247 aa 
Translation table11 
GC content59% 
IMG OID641616079 
Producttail assembly protein 
Protein accessionYP_001743262 
Protein GI170679766 
COG category[R] General function prediction only 
COG ID[COG1310] Predicted metal-dependent protease of the PAD1/JAB1 superfamily 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.000820398 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGACAGAGA CAGAATCAGC GATTCTGGCG CACGCCCGGC GATGTGCGCC AGCGGAGTCG 
TGCGGCTTCG TGGTGAGAAC GCCGGAGGGG GTCAGATATT TTCCCTGCGT GAATATCTCC
GGTGAGCCGG AGGCGTATTT CCGGATGTCG CCGGAGGACT GGCTGCGTGC ACAAATGCAG
GGGGAGGTTG TGGCACTGGT CCACAGCCAC CCCGGTGGTC TGCCCTGGCT GAGTGAGGCT
GACAGGCGGC TGCAGGTGCA GAGTGATTTG CCGTGGTGGC TGGTCTGCCG GGGGGCGATT
CACAAGTTCC GCTGTGTGCC ACATCTTACC GGGCGGCGCT TTGAGCACGG GGTGACGGAC
TGTTACACGC TGTTCCGGGA TGCATACCAT CTGGCGGAAA TTGAGATGCC GGATTTTTAT
CGCGGGGATG ACTGGTGGCG TAACGGCCAG AATCTCTATC TTGAAAATAT GGAGGCGACT
GGTTTTTACC GTGTCGCACT GACAGAGGCG CAGCCGGGCG ATGTGCTGCT GTGCTGTTTT
GGTTCATCGG TGCCGAATCA TGCCGCCATT TACTGCGGCG ACGGCGAGCT GCTGCACCAT
ATTCCTGAAC AACTGAGCAA ACGAGAGAGG TATACCGACA AATGGCAGCG ACGCACACAC
TCCCTCTGGC GTCACCGGGC ATGGCACGCA TCTGCCTTTA CGGGAATTTA CAACGATTTG
GCCGCCGCAT CGACCTTCGT GTGA
 
Protein sequence
MTETESAILA HARRCAPAES CGFVVRTPEG VRYFPCVNIS GEPEAYFRMS PEDWLRAQMQ 
GEVVALVHSH PGGLPWLSEA DRRLQVQSDL PWWLVCRGAI HKFRCVPHLT GRRFEHGVTD
CYTLFRDAYH LAEIEMPDFY RGDDWWRNGQ NLYLENMEAT GFYRVALTEA QPGDVLLCCF
GSSVPNHAAI YCGDGELLHH IPEQLSKRER YTDKWQRRTH SLWRHRAWHA SAFTGIYNDL
AAASTFV