| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_1186 |
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| Symbol | |
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| ID | 6146211 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli SMS-3-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010498 |
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| Strand | + |
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| Start bp | 1192092 |
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| End bp | 1193849 |
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| Gene Length | 1758 bp |
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| Protein Length | 585 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 641616064 |
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| Product | putative phage terminase, large subunit |
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| Protein accession | YP_001743247 |
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| Protein GI | 170684273 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4626] Phage terminase-like protein, large subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.619537 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.0000000060413 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGCAAAAG TGGCTGACGG GATCCGCTAC GCCGAACGTG TTGTTGCAGG AGAAATTGTT
GCTGGCGAAT TTGTCCGCCT GGCCTGCCAG CGTTTTCTTG ATGATCTGAA GTACGGCGAA
GAGCGGGGGA TTTATTTCAG TGAACCCCGT GCGCAGCACA TCCTGAATTT CTACAAATTT
GTGCCTCATG TAAAAGGGGC GCTGGCAGGC CAGCCCATTG AGTTGATGGA CTGGCATGTA
TTTATCCTCA TTAATATTTT TGGTTTTGTC ATTCCGCTGG TCAATGAAGA GACCGGGGAA
GTTGTCATGC GCAGCGATGG CAGCGGACGT CCGGTGATGG TGCGCCGGTT CCGGACGGCG
TACAACGAAG TCGCCCGTAA AAACGCAAAA TCAACTCTGT CATCGGGTAT CGGCCTGTAT
ATGACGGGGG CAGATGGTGA AGGCGGAGCT GAGGTGTATT CAGCCGCAAC CACGCGTGAC
CAGGCCAGAA TCGTGTTTGA AGACGCCAAA AATATGGTCA GAAAAGCCCG GTCGACACTC
GGGCGGTTGT TTGATTTCAA CAAGCTGGCG ATTTACCAGG AGCAGAGCGC ATCAAAATTT
GAACCGCTTT CTTCGGATGC AAACAACCTG GATGGTCTGA ACATCCACTG CGCCATTATT
GATGAGCTGC ATGCACATAA AACTCGTGAC GTGTGGGACG TTCTGGAAAC GGCAACCGGT
GCCCGTCTGC AGTCCCTTTT ATTTGGTATC ACCACGGCAG GGTTTAACAA GGAAGGGATT
TGTTACGAGC AGCGTGATTA CGCCATCAAG GTATTGCGTG GCTATAACAG CGACGTGGAG
GGCGCGGTAA AAGACGACTC CTACTTTGCG ATTATTTACA CCCTCGATGA GGGAGATGAT
CCGTTTGATG AAACGGTCTG GCAGAAAGCG AATCCCGGCC TGGGCATCTG TAAACGCTGG
GATGATCTGC GTCGCCTGGC GAAAAAAGCG AAAGAACAGG TCTCTGCGCG GGTGAATTTT
TTTACCAAAC ACATGAATGT GTGGGTAACA GCAGAGTCTG CCTGGATGGA CATGATTAAG
TGGGATAAGT GCGAATACAT TGCCCCACGA CATGAGCTGA AAACGTATCC CATGTGGGTC
GGCGTTGACC TTGCTCATAA GATTGATATC TGTGCGGCGG CAAAACTCTG GCGAACGGAT
AACGGGCATG TTCATGCCGA TTTTAAATTC TGGCTTCCGG AAGGACGGCT GGAACGATGC
TCGCGGCAGC AGGCAGAACT TTACCGGAAG TGGGCGGAGA TGGATAAGCT GATTCTGACG
GATGGTGATG TTATCGATCA TGCTCAGATA AAAAGTGACT TACTGGAATG GATTGGTGGT
GAAAACCTCA GGGAACTGGG ATTTGACCCG TGGAGCGCGA TGCAGTTCAG CCTGGCACTG
GCTGAAGAAG GGATACCGCT GGTGGAGGTT CCGCAGACGG TTCGCAATCT GTCAGAGGCC
ATGAAGGAAA CGGAATCACT GGTCTATGCC GGGCGTTTCC ATCACAGCAA TCATCCGGTC
ATGAACTGGA TGATGTCTAA CGTTACGGTA AAACCGGACA AAAACGACAA TATCTTCCCG
AATAAATCCA CGCTGGAAGC CAAAATCGAC GGCCCTGTTG CGATGTTTAC AGCAATGAGC
CGGATGCTGG TCAATGGTGG TGAACCGGAG CTGGATCTGT CTGAACATCT GGTCAGCGTG
GGCATCCGCT CGCTTTAA
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| Protein sequence | MAKVADGIRY AERVVAGEIV AGEFVRLACQ RFLDDLKYGE ERGIYFSEPR AQHILNFYKF
VPHVKGALAG QPIELMDWHV FILINIFGFV IPLVNEETGE VVMRSDGSGR PVMVRRFRTA
YNEVARKNAK STLSSGIGLY MTGADGEGGA EVYSAATTRD QARIVFEDAK NMVRKARSTL
GRLFDFNKLA IYQEQSASKF EPLSSDANNL DGLNIHCAII DELHAHKTRD VWDVLETATG
ARLQSLLFGI TTAGFNKEGI CYEQRDYAIK VLRGYNSDVE GAVKDDSYFA IIYTLDEGDD
PFDETVWQKA NPGLGICKRW DDLRRLAKKA KEQVSARVNF FTKHMNVWVT AESAWMDMIK
WDKCEYIAPR HELKTYPMWV GVDLAHKIDI CAAAKLWRTD NGHVHADFKF WLPEGRLERC
SRQQAELYRK WAEMDKLILT DGDVIDHAQI KSDLLEWIGG ENLRELGFDP WSAMQFSLAL
AEEGIPLVEV PQTVRNLSEA MKETESLVYA GRFHHSNHPV MNWMMSNVTV KPDKNDNIFP
NKSTLEAKID GPVAMFTAMS RMLVNGGEPE LDLSEHLVSV GIRSL
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