Gene EcSMS35_1183 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcSMS35_1183 
Symbol 
ID6146971 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli SMS-3-5 
KingdomBacteria 
Replicon accessionNC_010498 
Strand
Start bp1190071 
End bp1190604 
Gene Length534 bp 
Protein Length177 aa 
Translation table11 
GC content52% 
IMG OID641616061 
Productphage lysozyme 
Protein accessionYP_001743244 
Protein GI170681309 
COG category[R] General function prediction only 
COG ID[COG3772] Phage-related lysozyme (muraminidase) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00117162 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.0000000000363783 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAACGCAA TAATCAGATA CGGCCTGTCG GCTGCCGTTC TGGCACTGAT TGCCGTCGGT 
GCGCCCGCGC CTGATATTCT CGACCAGTTT CTGGATGAAA AAGAAGGTAA CCACACAACG
GCATACCGCG ATGGTTCCGG CATCTGGACC ATCTGTCGGG GTGCCACGAT GGTGGATGGA
AAACCCGTTT TTCCCGGTAT GAAACTGTCG AAGGAAAAAT GCGACCAGGT CAACGCCATT
GAGCGTGATA AGGCGCTGGC ATGGGTGGAG CGCAATATTA AAGTACCACT GACCGAACCA
CAAAAAGCGG GTATCGCGTC ATTTTGTCCC TATAACATTG GCCCCGGTAA GTGTTTTCCA
TCGACGTTTT ATAAGCGGCT GAATGCTGGT GATCGTAAGG GCGCATGCGA GGCGATTCGC
TGGTGGATAA AAGATGGTGG GCGCGATTGC CGCATACGTT CAAATAACTG CTATGGACAG
GTTATTCGTC GTGACCAGGA AAGCGCATTA GCCTGTTGGG GAATAGATCA GTGA
 
Protein sequence
MNAIIRYGLS AAVLALIAVG APAPDILDQF LDEKEGNHTT AYRDGSGIWT ICRGATMVDG 
KPVFPGMKLS KEKCDQVNAI ERDKALAWVE RNIKVPLTEP QKAGIASFCP YNIGPGKCFP
STFYKRLNAG DRKGACEAIR WWIKDGGRDC RIRSNNCYGQ VIRRDQESAL ACWGIDQ