Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcSMS35_1183 |
Symbol | |
ID | 6146971 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli SMS-3-5 |
Kingdom | Bacteria |
Replicon accession | NC_010498 |
Strand | + |
Start bp | 1190071 |
End bp | 1190604 |
Gene Length | 534 bp |
Protein Length | 177 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 641616061 |
Product | phage lysozyme |
Protein accession | YP_001743244 |
Protein GI | 170681309 |
COG category | [R] General function prediction only |
COG ID | [COG3772] Phage-related lysozyme (muraminidase) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.00117162 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.0000000000363783 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAACGCAA TAATCAGATA CGGCCTGTCG GCTGCCGTTC TGGCACTGAT TGCCGTCGGT GCGCCCGCGC CTGATATTCT CGACCAGTTT CTGGATGAAA AAGAAGGTAA CCACACAACG GCATACCGCG ATGGTTCCGG CATCTGGACC ATCTGTCGGG GTGCCACGAT GGTGGATGGA AAACCCGTTT TTCCCGGTAT GAAACTGTCG AAGGAAAAAT GCGACCAGGT CAACGCCATT GAGCGTGATA AGGCGCTGGC ATGGGTGGAG CGCAATATTA AAGTACCACT GACCGAACCA CAAAAAGCGG GTATCGCGTC ATTTTGTCCC TATAACATTG GCCCCGGTAA GTGTTTTCCA TCGACGTTTT ATAAGCGGCT GAATGCTGGT GATCGTAAGG GCGCATGCGA GGCGATTCGC TGGTGGATAA AAGATGGTGG GCGCGATTGC CGCATACGTT CAAATAACTG CTATGGACAG GTTATTCGTC GTGACCAGGA AAGCGCATTA GCCTGTTGGG GAATAGATCA GTGA
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Protein sequence | MNAIIRYGLS AAVLALIAVG APAPDILDQF LDEKEGNHTT AYRDGSGIWT ICRGATMVDG KPVFPGMKLS KEKCDQVNAI ERDKALAWVE RNIKVPLTEP QKAGIASFCP YNIGPGKCFP STFYKRLNAG DRKGACEAIR WWIKDGGRDC RIRSNNCYGQ VIRRDQESAL ACWGIDQ
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