| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_1152 |
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| Symbol | |
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| ID | 6143440 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli SMS-3-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010498 |
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| Strand | - |
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| Start bp | 1174838 |
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| End bp | 1177279 |
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| Gene Length | 2442 bp |
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| Protein Length | 813 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 641616030 |
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| Product | exonuclease family protein |
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| Protein accession | YP_001743217 |
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| Protein GI | 170684076 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.000000192952 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | 3 |
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| Fosmid unclonability p-value | 2.23987e-16 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAGCACTG ATAAAGAAGA ATTTGCACTA TATTGCGAAG CAAAAAATGA CAAAGTAAGA
AAACGCCTGG GAATTAAAGG TGGTTTTTAC TGGACTACAG CAAAAAAATT ATCTGTTGCA
ATCTCCCGCT GCATTACCGC AATGGATGAC AACGATTATG ATGAAGACGA CTTTAAAAAA
CCCGTCCGCG TCAATTTGCC CGTTGTTGAC GACCTTCCGC CAGAAGGCGT GTTTGATACT
GAATTCTGCA ACCGCTATGA AAAAGGCGGG AAAGATGGCA TCACAATGAC ATTTATCGGC
CCTTCCCCCT CTGTTCAGGA CAAACCAGCC AGCACTGACA ATACCAACAT CAACGGCGAA
GACATGACTG AGATTGAGGA GAGCATGCTT CTGCCTGTCT CCGGTCAGGA ACTGCCCATT
CGTTGGCTTG CTCAACACGG CAGCGAAAAA CCAGTAACGC ACGTTTCACG CGACGAACTC
CAGGCATTAC ACATTGCACG GGCTGAAGAA CTACCGGCTG TTACTGCCCT GGCTATTTCG
CATAAAACCA GTCTGCTCGA CTCGCTGGAG ATTCGCGACC TCCACAAACT GGTTCGTGAC
ACTGACAAAG TTTTCCCTAA TCCTGGTAAT TCAGACCTGG GACTAATAAC TGCTTTTTTC
GAAGCATACC TGGACGCTGA CTACACTGAT CGGGGTCTGC TGACAAAAGA GTGGATGAAA
GGAAATCGTG TTTCACGCAT CACCCGCACG GCTTCCGGTG CTAATGCTGG CGGTGGGAAC
AAAACCGATC GCAATCCGAA TTTAGTACAC ACCCTCGACA CACTGGATGT GGAGATTGCA
GCAGCCACAC TTCCGATGGA TTTTAATATT TATGAAATTC CGGGCAGCGT TTATCGTCGC
GCAAAAGAAG TAGTCCTGAA CAAAGAAAGT CCGTTCAAAG AATGGTCCGC AGCACTTCGT
GCAACCCCGG GTATTCTGGA CTATTCCCGC GCCGCTATTT TTGCACTTAT CCGAAGCGCA
CACCCTGAAT TTTATCACTA CCCGGGACGC CTTCAGGGGT ATATCAACGC CTATTTGACG
GAAACTGATC ACGAGAACCC CAGCAAGGAA ACTCTCACAG CTGCCCGGCA TACGCCGGAA
AAAGATATCC TGGAAGAAAT TAACCGCGAG GTGGTTACTG AGCGTGAAAC AGAAGAAGAA
AAACCACAAC CATCTGACGC AATGGCAGGT GAACAGGCAA CAACTGAAAC AATGGAACCG
GATACAACTG AACATGGCCA GAACGCGCAG TCGCTGGATG CTCAGTCGCA GGTGAGTTCC
GCTAACCAAG TAAAAGTCAC CGCTGACGAA GTAAACAAAA TTATGCAGGC AGCCAATATC
AGCCAGCCTG ACGCCGATAA GTTACTTGCT GTATCGCGTG GTGAATTTGT TGAGGGGATT
AGCGACCCTA ATGATCCGAA ATGGGTCAAG GGGATCCAGA CTCGCGATTC TGTGAACCAG
AACCAGCATG AATCGGAACG GAACGACCAA AAAGCGGAAC AAAACAGCCC AAATGCGTTA
CAAAACGAGC CAGAAACGAA ACAATCCGAA CCAGTAGCGC AACAGGAACC GGAAAAAGTC
TGCACCGCCT GCGGTCAGAG CGGTGGCGGC AACTGCCCTG ATTGTGGCGC GGTGATGGGC
GACGCAACAT ACCAGGAAAC ATTCGATGAA GAGAATCAGG TTGAAGTTCA GGAAAATGAT
CCGGAGGAAA TGGAAGGCGC TGAACATCCA CACAAGGAGA ACCCTGGCGG CAATCAGCAT
CACGCCAGCG ATAATAAAAC TGGCGAGACG GCAGATCACC CAATTAAGGT GAACGGTCAT
CACGAAATCA CATCCACCAG CAGGACGTGT GACCATCTAA TGATCGACCT TGAAACCATG
GGAAAAAATC CTGATGCCCC GATCATCTCA ATAGGTGCAA TATTTTTCGA TCCGCAAACC
GGAGATATGG GACCGGAATT TAGTAAGACT ATCGATCTGG AAACTGCTGG CGGAGTCATT
GATCGGGACA CCATTAAATG GTGGCTTAAG CAATCACGCG AAGCGCAATC TGCCATTATG
ACCGATGAAA TCCCGTTAGA TGATGCACTG TTACAATTGC GGGAATTTAT CGACGAAAAC
TCCGGTGAAT TTTTTGTTCA GGTTTGGGGA AATGGAGCCA ACTTCGACAA CACGATTTTG
CGCCGTTCAT ACGAACGGCA GGGGATCCCC TGCCCGTGGC GTTACTACAA CGATCGCGAT
GTACGCACAA TCGTTGAGCT GGGGAAAGCC ATAGACTTCG ATGCCAGAAC GGCTATTCCA
TTCGAAGGTG AGCGCCATAA TGCACTTGAT GACGCTCGTT ACCAGGCAAA ATACGTTTCA
GCTATCTGGC AAAAACTGAT CCCGAGTCAG GCTGATTTTT AA
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| Protein sequence | MSTDKEEFAL YCEAKNDKVR KRLGIKGGFY WTTAKKLSVA ISRCITAMDD NDYDEDDFKK
PVRVNLPVVD DLPPEGVFDT EFCNRYEKGG KDGITMTFIG PSPSVQDKPA STDNTNINGE
DMTEIEESML LPVSGQELPI RWLAQHGSEK PVTHVSRDEL QALHIARAEE LPAVTALAIS
HKTSLLDSLE IRDLHKLVRD TDKVFPNPGN SDLGLITAFF EAYLDADYTD RGLLTKEWMK
GNRVSRITRT ASGANAGGGN KTDRNPNLVH TLDTLDVEIA AATLPMDFNI YEIPGSVYRR
AKEVVLNKES PFKEWSAALR ATPGILDYSR AAIFALIRSA HPEFYHYPGR LQGYINAYLT
ETDHENPSKE TLTAARHTPE KDILEEINRE VVTERETEEE KPQPSDAMAG EQATTETMEP
DTTEHGQNAQ SLDAQSQVSS ANQVKVTADE VNKIMQAANI SQPDADKLLA VSRGEFVEGI
SDPNDPKWVK GIQTRDSVNQ NQHESERNDQ KAEQNSPNAL QNEPETKQSE PVAQQEPEKV
CTACGQSGGG NCPDCGAVMG DATYQETFDE ENQVEVQEND PEEMEGAEHP HKENPGGNQH
HASDNKTGET ADHPIKVNGH HEITSTSRTC DHLMIDLETM GKNPDAPIIS IGAIFFDPQT
GDMGPEFSKT IDLETAGGVI DRDTIKWWLK QSREAQSAIM TDEIPLDDAL LQLREFIDEN
SGEFFVQVWG NGANFDNTIL RRSYERQGIP CPWRYYNDRD VRTIVELGKA IDFDARTAIP
FEGERHNALD DARYQAKYVS AIWQKLIPSQ ADF
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