| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_1142 |
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| Symbol | |
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| ID | 6143060 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli SMS-3-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010498 |
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| Strand | - |
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| Start bp | 1159392 |
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| End bp | 1160108 |
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| Gene Length | 717 bp |
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| Protein Length | 238 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 641616020 |
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| Product | hypothetical protein |
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| Protein accession | YP_001743209 |
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| Protein GI | 170679717 |
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| COG category | [S] Function unknown |
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| COG ID | [COG0217] Uncharacterized conserved protein |
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| TIGRFAM ID | [TIGR01033] DNA-binding regulatory protein, YebC/PmpR family |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.0000000394813 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.000003904 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | GTGGGACGTA AATGGGCCAA TATTGTTGCT AAAAAAACGG CTAAAGACGG TGCAACGTCT
AAAATTTATG CAAAATTCGG TGTAGAAATC TATGCTGCTG CCAAACAAGG TGAACCTGAT
CCAGAATTAA ACACATCTTT AAAATTCGTT ATTGAACGTG CAAAGCAGGC ACAAGTTCCA
AAGCACGTTA TTGATAAAGC AATTGATAAA GCCAAAGGCG GCGGAGATGA AACGTTCGTG
CAGGGACGTT ATGAAGGCTT TGGTCCTAAT GGCTCAATGA TTATCGCCGA GACATTGACT
TCAAATGTTA ACCGTACGAT TGCTAACGTT CGCACAATTT TCAATAAAAA AGGCGGCAAT
ATCGGAGCGG CAGGTTCTGT CAGCTATATG TTTGACAATA CGGGTGTGAT TGTATTTAAG
GGGACAGACC CTGACCATAT TTTTGAAATT TTACTTGAAG CTGAAGTTGA TGTTCGTGAT
GTGACTGAAG AAGAAGGTAA CATTGTTATT TATACTGAAC CTACTGACCT TCATAAAGGA
ATCGCGGCTC TAAAAGCAGC TGGAATCACT GAGTTCTCAA CAACAGAATT AGAAATGATT
GCTCAATCTG AAGTTGAGCT TTCCCCAGAA GATTTAGAAA TCTTTGAAGG GCTTGTTGAT
GCCCTTGAAG ATGACGACGA TGTACAAAAA GTTTATCATA ACGTCGCAAA TCTCTAA
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| Protein sequence | MGRKWANIVA KKTAKDGATS KIYAKFGVEI YAAAKQGEPD PELNTSLKFV IERAKQAQVP
KHVIDKAIDK AKGGGDETFV QGRYEGFGPN GSMIIAETLT SNVNRTIANV RTIFNKKGGN
IGAAGSVSYM FDNTGVIVFK GTDPDHIFEI LLEAEVDVRD VTEEEGNIVI YTEPTDLHKG
IAALKAAGIT EFSTTELEMI AQSEVELSPE DLEIFEGLVD ALEDDDDVQK VYHNVANL
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