| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_1139 |
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| Symbol | |
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| ID | 6143626 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli SMS-3-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010498 |
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| Strand | + |
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| Start bp | 1157310 |
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| End bp | 1158764 |
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| Gene Length | 1455 bp |
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| Protein Length | 484 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 641616017 |
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| Product | hypothetical protein |
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| Protein accession | YP_001743207 |
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| Protein GI | 170684252 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0534] Na+-driven multidrug efflux pump |
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| TIGRFAM ID | [TIGR00797] putative efflux protein, MATE family |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.0000000023845 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.0000334983 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | TTGAATATCT CCTCTGCTTT ACGCCAGGTT GTTCACGGCA CTCGCTGGCA CGCTAAACGC
AAGAGCTACA AAGTGTTGTT CTGGCGCGAG ATAACCCCGC TTGCTGTTCC TATCTTCATG
GAGAATGCCT GTGTCCTGTT GATGGGTGTC CTGAGCACTT TTCTGGTCAG CTGGCTGGGA
AAAGATGCGA TGGCCGGCGT GGGATTGGCG GACAGCTTCA ATATGGTCAT TATGGCTTTT
TTTGCTGCTA TCGATCTTGG TACTACTGTC GTTGTGGCAT TTAGTCTCGG TAAGCGGGAT
CGACGACGAG CGAGGGTGGC GACGCGGCAG TCATTGGTGA TCATGACGTT GTTTGCCGTA
CTGTTGGCAA CGCTTATTCA TCATTTTGGC GAACAAATTA TTGATTTCGT CGCGGGTGAT
GCCACGACAG AAGTTAAAGC ACTGGCGTTG ACTTATCTGG AGCTGACGGC ACTCAGTTAT
CCAGCAGCTG CCATCACTTT GATTGGTAGC GGGGCACTTC GTGGTGCAGG GAATACGAAA
ATACCGCTAC TGATTAACGG TAGCCTGAAT ATTCTTAATA TTATTATTAG CGGCATATTG
ATTTACGGCC TTTTCTCCTG GCCGGGACTG GGATTTGTCG GGGCTGGGTT GGGTTTAACC
ATTTCTCGTT ATATTGGCGC AGTTGCAATT TTGTGGGTGC TGGCGATTGG TTTTAATCCT
GCGCTAAGGA TTTCGTTAAA GAGCTATTTT AAACCGCTGA ATTTTAGCAT TATCTGGGAA
GTCATGGGGA TTGGTATTCC AGCGAGTGTC GAATCAGTGT TATTTACCAG TGGTCGGTTA
TTAACCCAAA TGTTCGTTGC CGGGATGGGG ACCAGTGTTA TTGCCGGAAA TTTTATCGCG
TTTTCAATTG CGGCTCTTAT CAACTTACCC GGAAGTGCGC TCGGCTCTGC TTCTACGATC
ATTACAGGCC GAAGGTTGGG GGTAGGGCAG ATAGCGCAAG CAGAGATTCA GTTGCGGCAT
GTGTTCTGGC TTTCCACTCT TGGATTAACG GCCATCGCCT GGCTAACGGC TCCCTTTGCC
GGGGTTATGG CATCGTTTTA CACCCAGGAT CCACAGGTTA AACATGTCGT TGTGATTCTG
ATTTGGCTAA ATGCTTTATT TATGCCTATT TGGTCCGCCT CATGGGTGCT ACCCGCTGGA
TTTAAAGGTG CTCGCGATGC CCGTTACGCC ATGTGGGTTT CTATGTTGAG CATGTGGGGT
TGCCGGGTTG TCGTCGGTTA TGTGCTGGGC ATCATGCTTG GCTGGGGTGT GGTTGGTGTC
TGGATGGGAA TGTTTGCCGA CTGGGCTGTG CGGGCCGTGC TGTTTTACTG GCGAATGGTT
ACTGGACGTT GGCTGTGGAA ATACCCTCGA TCCGAACCGC AAAAGTGTGA AAAAAAGCCA
GCTGTGTCGG AATAA
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| Protein sequence | MNISSALRQV VHGTRWHAKR KSYKVLFWRE ITPLAVPIFM ENACVLLMGV LSTFLVSWLG
KDAMAGVGLA DSFNMVIMAF FAAIDLGTTV VVAFSLGKRD RRRARVATRQ SLVIMTLFAV
LLATLIHHFG EQIIDFVAGD ATTEVKALAL TYLELTALSY PAAAITLIGS GALRGAGNTK
IPLLINGSLN ILNIIISGIL IYGLFSWPGL GFVGAGLGLT ISRYIGAVAI LWVLAIGFNP
ALRISLKSYF KPLNFSIIWE VMGIGIPASV ESVLFTSGRL LTQMFVAGMG TSVIAGNFIA
FSIAALINLP GSALGSASTI ITGRRLGVGQ IAQAEIQLRH VFWLSTLGLT AIAWLTAPFA
GVMASFYTQD PQVKHVVVIL IWLNALFMPI WSASWVLPAG FKGARDARYA MWVSMLSMWG
CRVVVGYVLG IMLGWGVVGV WMGMFADWAV RAVLFYWRMV TGRWLWKYPR SEPQKCEKKP
AVSE
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