Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcSMS35_1132 |
Symbol | cobS |
ID | 6143220 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli SMS-3-5 |
Kingdom | Bacteria |
Replicon accession | NC_010498 |
Strand | + |
Start bp | 1151745 |
End bp | 1152488 |
Gene Length | 744 bp |
Protein Length | 247 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 641616010 |
Product | cobalamin synthase |
Protein accession | YP_001743202 |
Protein GI | 170681294 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0368] Cobalamin-5-phosphate synthase |
TIGRFAM ID | [TIGR00317] cobalamin 5'-phosphate synthase/cobalamin synthase |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.00743672 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 0.000086759 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAGTAAAT TATTTTGGGC GATGCTCTCT TTTATTACGC GTCTGCCTGT ACCGCGTCGC TGGTCCCAGG GACTGGATTT CGAGCATTAT TCTCGCGGTA TTATTACTTT TCCTTTAATT GGATTATTGC TTGGCGCGAT TAGCGGGCTG GTCTTCATGG TGCTGCAGGC ATGGTGTGGC GTACCACTGG CGGCACTGTT TAGCGTGCTT GTGCTGGCGC TGATGACCGG GGGATTCCAC CTGGACGGCC TCGCCGATAC CTGTGATGGC GTATTTTCTG CACGTAGCCG CGATCGCATG TTGGAAATCA TGCGTGATAG CCGTTTAGGC ACCCACGGCG GTCTGGCATT GATTTTTGTG GTACTGGCAA AGATTCTGGT GTTAAGCGAG TTGGCTCTGC GTGGCGAACC GATCCTTGCA TCGCTGGCGG CAGCATGTGC GGTCAGCCGC GGGACTGCCG CATTATTGAT GTATCGTCAT CGTTATGCCC GGGAAGAAGG GCTTGGCAAT GTGTTCATTG GCAAAATTGA TGGGCGACAA ACCTGCGTCA CACTCGGCTT AGCCGCTATT TTTGCTGCCG TATTATTGCC GGGTATGCAT GGTGTGGCTG CTATGGTGGT GACGATGGTG GCGATTTTCA TCCTCGGTCA GCTTCTCAAA CGTACGCTGG GCGGGCAAAC CGGCGATACG CTGGGAGCTG CTATAGAGCT TGGTGAACTG GTCTTCCTGC TGGCACTGCT ATAA
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Protein sequence | MSKLFWAMLS FITRLPVPRR WSQGLDFEHY SRGIITFPLI GLLLGAISGL VFMVLQAWCG VPLAALFSVL VLALMTGGFH LDGLADTCDG VFSARSRDRM LEIMRDSRLG THGGLALIFV VLAKILVLSE LALRGEPILA SLAAACAVSR GTAALLMYRH RYAREEGLGN VFIGKIDGRQ TCVTLGLAAI FAAVLLPGMH GVAAMVVTMV AIFILGQLLK RTLGGQTGDT LGAAIELGEL VFLLALL
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