| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_1122 |
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| Symbol | |
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| ID | 6144736 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli SMS-3-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010498 |
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| Strand | - |
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| Start bp | 1140962 |
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| End bp | 1142278 |
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| Gene Length | 1317 bp |
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| Protein Length | 438 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 641616002 |
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| Product | anaerobic C4-dicarboxylate transporter |
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| Protein accession | YP_001743194 |
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| Protein GI | 170681956 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2704] Anaerobic C4-dicarboxylate transporter |
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| TIGRFAM ID | [TIGR00770] anaerobic c4-dicarboxylate membrane transporter family protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 41 |
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| Fosmid unclonability p-value | 0.253067 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACGCTC TATTTTTTAT ACAACTATTT ATTGTTCTGG CCTGTATTGG AATCGGCGGA
AAATACGGCG GAATGGGGCT TGGTGCTGGA GGTGGGTTAG GGGTTGCAAT ATTGGTTTTG
GGCTTTGGAC TGAAACCCTC CTCTCCCTCC ATTACTGCTA TGTTAATTAT TATTTGTGTT
ATTAGTGCTG TCAGTATATT ACAAGCTGTT GGAGGATTAG ATTATTTAGT CAGGGTCGCA
GAACGGATAC TCCGTAAGAA ACCACAGGCG ATAACCTTTG TAGCGCCAAT ATTAACTTCA
GTATTTACAC TATTTTGTGG GACGACTTAT GTCGCTTTCT CCTTATACCC TGTTATTGCT
GAAGTCGCCG CTGAAGCAAA AGTACGTCCA GAACGTGCAT TATCTGCAAC GGTCATTGCA
GCCAGTGTGG CAGTGGCTGC CAGCCCTATG AGTGCAGCAA CTGCCGGGAT GCTGGCTATA
CTTCATGAGT ATGCAGGGAT CACGTTAGGG CAAATATTAT CTATTGCCCT TCCTTCGTTT
TTTATGGCTG CAATTGTTAC CAGCTTTTCA GTCTACAAGC GTGGTAAAGA ACTGGAAGAT
GATCCTGAAT TTCAAAGGCG TGTTGCAGCA GGTGAGTATG AGTTCATGCA CACCGAACAG
AAAAAAGAAT ATGTCGCTGC ACCAGGTGCA AGAAAAGGGG TTGCTATTTT TGCCATAGGA
GTCGTGCTGG TCCTTATTCT CGGATCTTTT ACTGAGCTTC TTCCGTCGTG GGATGGAAAA
AGATTATCAA CCCCAATGGT CATCCAGATG ATTATGTTGA CTGCAGCTTT ATTGATCATG
ATTGTGGGGA AAGTTCCAAG CAATAAATTT AACAGTGGCT CTGTGTTCCG TGCTGGTTTG
ATGGGGGTTG TGGCAATACT TGGTGTTTCG TGGATGACTG CAACATTTTT TGATGCTTAT
CAGGCAGAGC TGATCAATGT TTTTGGCAAT CTTGTAAATG ATGCGCCTTT GCTGTTTGGC
TTTATCGTAT TCTTGTTTTC TCTGGTGATC ATGAGCCCGG CTGCGACAGT AGCTGCGATT
ATGCCATTAG GAGTCACCCT GGGTATTCCT GCACCTTATC TTATTGCAAT TTTTGCCTGT
ACTTGTGGTG ATTTTATTAT ACCCGGAGCG AATCAGATTG GTTGTGTGGC GTTTGACAGA
ACTGGTACTA CCAGAATTGG GCGCTTTGTT ATCAACCATA GCTATATACG TCCTGGGTTC
GTCATGGTCA TTTCCCAGGT TGTTTTTGCC TACTTAATTG CGCAGGTTAT TCTGTAA
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| Protein sequence | MDALFFIQLF IVLACIGIGG KYGGMGLGAG GGLGVAILVL GFGLKPSSPS ITAMLIIICV
ISAVSILQAV GGLDYLVRVA ERILRKKPQA ITFVAPILTS VFTLFCGTTY VAFSLYPVIA
EVAAEAKVRP ERALSATVIA ASVAVAASPM SAATAGMLAI LHEYAGITLG QILSIALPSF
FMAAIVTSFS VYKRGKELED DPEFQRRVAA GEYEFMHTEQ KKEYVAAPGA RKGVAIFAIG
VVLVLILGSF TELLPSWDGK RLSTPMVIQM IMLTAALLIM IVGKVPSNKF NSGSVFRAGL
MGVVAILGVS WMTATFFDAY QAELINVFGN LVNDAPLLFG FIVFLFSLVI MSPAATVAAI
MPLGVTLGIP APYLIAIFAC TCGDFIIPGA NQIGCVAFDR TGTTRIGRFV INHSYIRPGF
VMVISQVVFA YLIAQVIL
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