Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcSMS35_1106 |
Symbol | |
ID | 6145766 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli SMS-3-5 |
Kingdom | Bacteria |
Replicon accession | NC_010498 |
Strand | + |
Start bp | 1121526 |
End bp | 1122239 |
Gene Length | 714 bp |
Protein Length | 237 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 641615990 |
Product | mgtC family protein |
Protein accession | YP_001743182 |
Protein GI | 170679634 |
COG category | [S] Function unknown |
COG ID | [COG1285] Uncharacterized membrane protein |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 53 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAATACGT TATCCTTCTT ATTATTCAGT GAAGAAGAAT CTCTCTTTAT TACACTGGGC AAAATTTGCG TCGCGTTTAT CCTTGGTGGC ATTATTGGCC TTGAAAGAGA ATCGAAAGGG AAGCCTGTTG GATTTAAAAC GTGCGTCATT ATTTCAGTCG CCAGTTGTGT TCTGACAATT GTATCGATTC AGTCTGCAGA ATATTACGCT GAAATCTCGA TGAATATACG TAGCGATCCG ATGCGACTGG CAGCACAGAT TATCAGCGGT GTAGGTTTTC TCGGCGCAGG TGTTATCCTT CATCGCCATG ACGATGCTAT ATCTGGACTA ACAACTGCAG CTATCGTTTG GGCTTCGGCT GGGGTGGGAA TTACATGTGG TGCTGGGTTT TATATGCATG CTTTGGTTAC CACTGCTTTG TTCATGATTG CAATAAAACT CAGCTATTTT GTGCTCTTTT TGCAAGCTAA GAATCAATTT CCGGGTAAAG TAAAAGTTCA TGTTACTCTT GACGAAAGAT CAGGGCTACA AGCCCTGATA GAGTGTATTA ATCAACAAAA AAATATTATT GAAGCGTTCA CTATTCGCGA TGTTAAAAAG GGAAGAATAG AAGTTAACCT TAAGGTCGTG ATTAGAAAAA AAATGACATT ACCAGAACTA TACCATTCAC TCTCTAAGCT TGAACATGTT TGCGCTATCG CGCTGGAACA CTGA
|
Protein sequence | MNTLSFLLFS EEESLFITLG KICVAFILGG IIGLERESKG KPVGFKTCVI ISVASCVLTI VSIQSAEYYA EISMNIRSDP MRLAAQIISG VGFLGAGVIL HRHDDAISGL TTAAIVWASA GVGITCGAGF YMHALVTTAL FMIAIKLSYF VLFLQAKNQF PGKVKVHVTL DERSGLQALI ECINQQKNII EAFTIRDVKK GRIEVNLKVV IRKKMTLPEL YHSLSKLEHV CAIALEH
|
| |