Gene EcSMS35_1106 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcSMS35_1106 
Symbol 
ID6145766 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli SMS-3-5 
KingdomBacteria 
Replicon accessionNC_010498 
Strand
Start bp1121526 
End bp1122239 
Gene Length714 bp 
Protein Length237 aa 
Translation table11 
GC content40% 
IMG OID641615990 
ProductmgtC family protein 
Protein accessionYP_001743182 
Protein GI170679634 
COG category[S] Function unknown 
COG ID[COG1285] Uncharacterized membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones53 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATACGT TATCCTTCTT ATTATTCAGT GAAGAAGAAT CTCTCTTTAT TACACTGGGC 
AAAATTTGCG TCGCGTTTAT CCTTGGTGGC ATTATTGGCC TTGAAAGAGA ATCGAAAGGG
AAGCCTGTTG GATTTAAAAC GTGCGTCATT ATTTCAGTCG CCAGTTGTGT TCTGACAATT
GTATCGATTC AGTCTGCAGA ATATTACGCT GAAATCTCGA TGAATATACG TAGCGATCCG
ATGCGACTGG CAGCACAGAT TATCAGCGGT GTAGGTTTTC TCGGCGCAGG TGTTATCCTT
CATCGCCATG ACGATGCTAT ATCTGGACTA ACAACTGCAG CTATCGTTTG GGCTTCGGCT
GGGGTGGGAA TTACATGTGG TGCTGGGTTT TATATGCATG CTTTGGTTAC CACTGCTTTG
TTCATGATTG CAATAAAACT CAGCTATTTT GTGCTCTTTT TGCAAGCTAA GAATCAATTT
CCGGGTAAAG TAAAAGTTCA TGTTACTCTT GACGAAAGAT CAGGGCTACA AGCCCTGATA
GAGTGTATTA ATCAACAAAA AAATATTATT GAAGCGTTCA CTATTCGCGA TGTTAAAAAG
GGAAGAATAG AAGTTAACCT TAAGGTCGTG ATTAGAAAAA AAATGACATT ACCAGAACTA
TACCATTCAC TCTCTAAGCT TGAACATGTT TGCGCTATCG CGCTGGAACA CTGA
 
Protein sequence
MNTLSFLLFS EEESLFITLG KICVAFILGG IIGLERESKG KPVGFKTCVI ISVASCVLTI 
VSIQSAEYYA EISMNIRSDP MRLAAQIISG VGFLGAGVIL HRHDDAISGL TTAAIVWASA
GVGITCGAGF YMHALVTTAL FMIAIKLSYF VLFLQAKNQF PGKVKVHVTL DERSGLQALI
ECINQQKNII EAFTIRDVKK GRIEVNLKVV IRKKMTLPEL YHSLSKLEHV CAIALEH