| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_1105 |
|---|
| Symbol | |
|---|
| ID | 6145080 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli SMS-3-5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010498 |
|---|
| Strand | + |
|---|
| Start bp | 1120428 |
|---|
| End bp | 1121462 |
|---|
| Gene Length | 1035 bp |
|---|
| Protein Length | 344 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 641615989 |
|---|
| Product | inosine-uridine preferring nucleoside hydrolase |
|---|
| Protein accession | YP_001743181 |
|---|
| Protein GI | 170681581 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG1957] Inosine-uridine nucleoside N-ribohydrolase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 54 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGCTGCCA AGGGCATGAA GTTCAACCCG AGAAAAAGTG AAAATGAATC GATGCGTATC
ATTATTGACT GCGATCCGGG GAACGGCATT CCCGGCGCTA ATATCGACGA CGGTCTGGCG
CTGGCGCTGG CCATTGCCGC ACCGCAAATC GCGCTGGAAA TGATCACCAC TGTTGCCGGA
AATACGCCGG TAGACGTGGG ATATGCGGTC GCTAGAGATC TCATTACACA ATTGGATATT
CCTGTTGCGG TCTACCGTGG TGCCTCGCGT GCGCTCTTGG AAGATCCGCA ACCCTGGCGT
GAAAAACTGG ATCATGGTGT CGATCAGTTT GGTTTACGGC AACTCTGGTC GAATGTTCCT
GCTCCAGCAT TGTGCCAGCA GGTAGAACCC CATGCGCCTG AAGCAATAGG TGAACTCATC
TGTCGTAATC CAGGCGAAAT AACGTTGGTT GCTACCGGCC CCCTCACTAA TGTAGCCATC
GCCCTGCAGC TTTACCCGCA GATTGTTCAC GCGGTCAAAA ATATCGTCGT TATGGGTGGC
GTGTTCAATG TTCCAGGCTA CCTGAAAGAT ACAAATTTTG GTCTGGACCC TGAGGCGGCT
CATGCGGTGC TCACCAGCGG TGCGCCAGTC ACGCTGGTCC CGATGGATGT GACAACGCAA
ACCCAAATGC TTCACGCCGA TTTGGATCGT CTAGCAAAAA CAGAAAACGG GCTTAGCCGT
TATTTGGCAC AAACCATTCG ACCATGGATT ACATACTCTA TGCAAACCCG CAATCTGCCT
GGGTGTTGGA TCCACGATGT GTTAACCATT GCCTGGTTAC TGGATCCCTC TCTTGCAACA
ACGGCTGAAG ATTATCTGGA TGTATCTCTG GAAGGCATTA CACGCGGAAT GACTTGTTGC
TATGGACGTG ACACATTACG CCTCAATATT GGGATCCCTG AACCAAAAGG TGCACAGGTC
ACAATTCTGC AGAGCATCGA TAACCCGCGG CTTATTTCGC TGATAGAGCA CTATATCCAG
AACTACGGCG CGTAG
|
|---|
| Protein sequence | MAAKGMKFNP RKSENESMRI IIDCDPGNGI PGANIDDGLA LALAIAAPQI ALEMITTVAG
NTPVDVGYAV ARDLITQLDI PVAVYRGASR ALLEDPQPWR EKLDHGVDQF GLRQLWSNVP
APALCQQVEP HAPEAIGELI CRNPGEITLV ATGPLTNVAI ALQLYPQIVH AVKNIVVMGG
VFNVPGYLKD TNFGLDPEAA HAVLTSGAPV TLVPMDVTTQ TQMLHADLDR LAKTENGLSR
YLAQTIRPWI TYSMQTRNLP GCWIHDVLTI AWLLDPSLAT TAEDYLDVSL EGITRGMTCC
YGRDTLRLNI GIPEPKGAQV TILQSIDNPR LISLIEHYIQ NYGA
|
|---|
| |