| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_1104 |
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| Symbol | |
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| ID | 6147129 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli SMS-3-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010498 |
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| Strand | + |
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| Start bp | 1119437 |
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| End bp | 1120468 |
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| Gene Length | 1032 bp |
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| Protein Length | 343 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 641615988 |
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| Product | periplasmic sugar binding transcriptional regulator |
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| Protein accession | YP_001743180 |
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| Protein GI | 170680901 |
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| COG category | [K] Transcription |
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| COG ID | [COG1609] Transcriptional regulators |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.242225 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 53 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGACTCAAT CACATTCACA ACGCGTAACA CGTTCTGACG TGGCAAAAGA AGCAGGGACA
TCCGTCGCTG TCGTTAGTTA CGTTATTAAT AATGGCCCGC GCCCCGTTGC CGAAGCGACC
CGACAACGTG TACTACAGGC CATTAAGAAA ACCGGTTATC GACCCAATGG CATCGCGCGT
GCGCTGGCTT CAGGGAGTAC GCAAACTTAT GGGCTAGTCG CTCCGGACAT CTCGAACCCG
TTTATCGCCT CTATGGCTCA TGCCCTGCAA CACGAAGCCT TTGCTGATGG CAAAGTACTC
CTGCTGGGCG ACGCAGGCGA TAGTAGCTGC CGTGAACGTG AACTCATTAA TAATATGCTA
CACCGCCAGG TTGACGGGCT GATCTACACC AGTGTTGATC GCCATCCTTA TATCAATTTG
ATTCAGGAGA GCGGTACCCC CTGCGTCATG CTCGATCGTG TGGATCCTGG GCTTAACGTC
AGCGTTATCC AGGTTGATGA ACAACTGGCG GCGATGCAGG TAACACAACA TCTTATTGAT
CACGGATACC GCGACATCGG CATCATCTGC GGCCCGCGTG AAATGCTGAA TACTCAGGAT
CGTATCCGGG GCTGGCAGCA GGCGCTGGAA GCCTCATCGT TAGTGGTCAA TCCCTCATGG
ATTTTTTCGA CCAACTATAC CCGCGCCGGC GGTTACGAGG CGACAAAACG CATGCTTGAG
CACCAACTGC CACGCGCCCT GTTCGCGACA AATGAACAAC AGGCTCTCGG CTGTTTACGC
GCTTTGGCAG AACATGGGCT GCGCGTTCCT GAAGATGTTG CGCTGGTCTG CTTTAACGCA
ACACAAGAAT CGGCTTATAA CGTCCCTTCT TTAACCGCCG TTCGACAACC TGTCGATAAG
ATGGCCCGTG CGGCAATTGA CATGCTGAAA AATTGGGATG GAGAAGTTCG CCGTGTTGAA
TTTGAGTTTT ATTTACGAAC AGGAGAGTCG TGTGGCTGCC AAGGGCATGA AGTTCAACCC
GAGAAAAAGT GA
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| Protein sequence | MTQSHSQRVT RSDVAKEAGT SVAVVSYVIN NGPRPVAEAT RQRVLQAIKK TGYRPNGIAR
ALASGSTQTY GLVAPDISNP FIASMAHALQ HEAFADGKVL LLGDAGDSSC RERELINNML
HRQVDGLIYT SVDRHPYINL IQESGTPCVM LDRVDPGLNV SVIQVDEQLA AMQVTQHLID
HGYRDIGIIC GPREMLNTQD RIRGWQQALE ASSLVVNPSW IFSTNYTRAG GYEATKRMLE
HQLPRALFAT NEQQALGCLR ALAEHGLRVP EDVALVCFNA TQESAYNVPS LTAVRQPVDK
MARAAIDMLK NWDGEVRRVE FEFYLRTGES CGCQGHEVQP EKK
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