Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcSMS35_1101 |
Symbol | |
ID | 6147278 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli SMS-3-5 |
Kingdom | Bacteria |
Replicon accession | NC_010498 |
Strand | + |
Start bp | 1115586 |
End bp | 1116332 |
Gene Length | 747 bp |
Protein Length | 248 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 641615985 |
Product | IS911 transposase orfB |
Protein accession | YP_001743177 |
Protein GI | 170680489 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG2801] Transposase and inactivated derivatives |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 55 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGTGCAGCG AAATACGCCG GGCGTGGAAC CAAAGTAGGG GCTCTGCGGG GGCGCGCACG CTGGCTGAAA TGCTGACCCA AAACGGCGTC CCGATGAGCC GTTACCGTGC CGGGCGTCTG ATGAAATATC TGAACCTGAG CAGTTGTCAG CCCGGAAAAC ATCAGTACAA AAATGCTCGT CAGGAACATA CCTGCCTGCC GAATCTGCTT GAGCGCCAGT TCGCTGTGCC CGAGCCAGAT AGGGTATGGT GCGGAGATAT TACGTATATC TGGGCAGGAA ATCGCTGGTG CTATCTGGCG GTCGTCATGG ATCTTTTTGC CCGCAGGGTT ATCGGCTGGA GCCTGTCAGC GAATGCCGAT ACTGCCCTGA TAAGCAGTGC CCTGCGGATG GCGTATGAGG TGCGTGGTCA GCCGCGGGAC GTCATGTTCC ATAGCGACCA GGGAAGTCAA TATACAGGAC TGAAATATCA ACAACTTCTC TGGCGTTACA GGATAAAGCA AAGTGTCAGC CGACGGGGAA ACTGCTGGGA TAACAGTCCA ATGGAACGCT TCTTCCGCAG TCTGAAAACA GAATGGGTGC CAACCGATGG CTACACAGGC AAAGACGTGG CCCGGCAGCA AATCAGCAGT TATATTCTGA ATTATTACAA TAGCGTCAGG CCTCACCATT ATAACGGAGG GCTGACGCCG GAAGAGTCAG AGAACAGATA TCATTTTTAC TGTAAAACCG TGGCCAGTAT TACTTGA
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Protein sequence | MCSEIRRAWN QSRGSAGART LAEMLTQNGV PMSRYRAGRL MKYLNLSSCQ PGKHQYKNAR QEHTCLPNLL ERQFAVPEPD RVWCGDITYI WAGNRWCYLA VVMDLFARRV IGWSLSANAD TALISSALRM AYEVRGQPRD VMFHSDQGSQ YTGLKYQQLL WRYRIKQSVS RRGNCWDNSP MERFFRSLKT EWVPTDGYTG KDVARQQISS YILNYYNSVR PHHYNGGLTP EESENRYHFY CKTVASIT
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