Gene EcSMS35_1101 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcSMS35_1101 
Symbol 
ID6147278 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli SMS-3-5 
KingdomBacteria 
Replicon accessionNC_010498 
Strand
Start bp1115586 
End bp1116332 
Gene Length747 bp 
Protein Length248 aa 
Translation table11 
GC content53% 
IMG OID641615985 
ProductIS911 transposase orfB 
Protein accessionYP_001743177 
Protein GI170680489 
COG category[L] Replication, recombination and repair 
COG ID[COG2801] Transposase and inactivated derivatives 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones55 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGTGCAGCG AAATACGCCG GGCGTGGAAC CAAAGTAGGG GCTCTGCGGG GGCGCGCACG 
CTGGCTGAAA TGCTGACCCA AAACGGCGTC CCGATGAGCC GTTACCGTGC CGGGCGTCTG
ATGAAATATC TGAACCTGAG CAGTTGTCAG CCCGGAAAAC ATCAGTACAA AAATGCTCGT
CAGGAACATA CCTGCCTGCC GAATCTGCTT GAGCGCCAGT TCGCTGTGCC CGAGCCAGAT
AGGGTATGGT GCGGAGATAT TACGTATATC TGGGCAGGAA ATCGCTGGTG CTATCTGGCG
GTCGTCATGG ATCTTTTTGC CCGCAGGGTT ATCGGCTGGA GCCTGTCAGC GAATGCCGAT
ACTGCCCTGA TAAGCAGTGC CCTGCGGATG GCGTATGAGG TGCGTGGTCA GCCGCGGGAC
GTCATGTTCC ATAGCGACCA GGGAAGTCAA TATACAGGAC TGAAATATCA ACAACTTCTC
TGGCGTTACA GGATAAAGCA AAGTGTCAGC CGACGGGGAA ACTGCTGGGA TAACAGTCCA
ATGGAACGCT TCTTCCGCAG TCTGAAAACA GAATGGGTGC CAACCGATGG CTACACAGGC
AAAGACGTGG CCCGGCAGCA AATCAGCAGT TATATTCTGA ATTATTACAA TAGCGTCAGG
CCTCACCATT ATAACGGAGG GCTGACGCCG GAAGAGTCAG AGAACAGATA TCATTTTTAC
TGTAAAACCG TGGCCAGTAT TACTTGA
 
Protein sequence
MCSEIRRAWN QSRGSAGART LAEMLTQNGV PMSRYRAGRL MKYLNLSSCQ PGKHQYKNAR 
QEHTCLPNLL ERQFAVPEPD RVWCGDITYI WAGNRWCYLA VVMDLFARRV IGWSLSANAD
TALISSALRM AYEVRGQPRD VMFHSDQGSQ YTGLKYQQLL WRYRIKQSVS RRGNCWDNSP
MERFFRSLKT EWVPTDGYTG KDVARQQISS YILNYYNSVR PHHYNGGLTP EESENRYHFY
CKTVASIT