Gene EcSMS35_1100 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcSMS35_1100 
Symbol 
ID6146567 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli SMS-3-5 
KingdomBacteria 
Replicon accessionNC_010498 
Strand
Start bp1115155 
End bp1115466 
Gene Length312 bp 
Protein Length103 aa 
Translation table11 
GC content51% 
IMG OID641615984 
ProductIS911 transposase orfA 
Protein accessionYP_001743176 
Protein GI170683061 
COG category[L] Replication, recombination and repair 
COG ID[COG2963] Transposase and inactivated derivatives 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones54 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACAAGA AAACCAAACG TACTTTCACC CCTGAATTCA GGCTGGAATG TGCACAGCTA 
ATTGTTGATA AGGGCTACTC ATATCGACAA GCCAGTGAAG CGATGAATGT CGGTTCTACC
ACGCTTGAGA GTTGGGTGCG CCAGCTCAGG CGAGAGCGTC AGGGGATTGC GCCCTTTGCC
ACACCTATTA CTCCAGACCA GCAACGTATC CGCGAACTGG AAAAGCAGGT TCGCCGCCTG
GAGGAACACA ATACGATATT AAAAAAGGCT ACCGCGCTCT TGATGTCCGA CTCGCTGAAC
GGTTCACGAT AG
 
Protein sequence
MNKKTKRTFT PEFRLECAQL IVDKGYSYRQ ASEAMNVGST TLESWVRQLR RERQGIAPFA 
TPITPDQQRI RELEKQVRRL EEHNTILKKA TALLMSDSLN GSR