Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcSMS35_1095 |
Symbol | |
ID | 6144841 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli SMS-3-5 |
Kingdom | Bacteria |
Replicon accession | NC_010498 |
Strand | - |
Start bp | 1110613 |
End bp | 1111761 |
Gene Length | 1149 bp |
Protein Length | 382 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 641615979 |
Product | galactonate dehydratase |
Protein accession | YP_001743171 |
Protein GI | 170680994 |
COG category | [M] Cell wall/membrane/envelope biogenesis [R] General function prediction only |
COG ID | [COG4948] L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 54 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAATCA CCAAAATTAC CACGTATCGT TTACCTCCCC GCTGGATGTT CCTGAAAATT GAAACCGATG AAGGCGTGGT CGGCTGGGGC GAGCCCGTGA TCGAAGGCCG CGCCCGTACG GTGGAAGCGG CAGTTCACGA GCTGGGTGAC TATTTGATTG GTCAGGATCC ATCGCGCATC AATGACTTAT GGCAAGTGAT GTATCGCGCC GGATTTTATC GTGGAGGTCC AATCCTGATG AGCGCCATTG CCGGGATCGA CCAGGCGTTA TGGGATATCA AAGGCAAAGT GCTGAATTCG CCGGTCTGGC AACTGATGGG CGGCCTGGTG CGTGACAAAA TTAAAGCCTA CAGTTGGGTC GGCGGCGATC GTCCGGCGAA TGTTATCGAC GGAATAAAAA TCCTGCGCGA AATCGGTTTT GATACCTTCA AACTGAATGG TTGTGAAGAA CTGGGGCTAA TTGATAACTC CCGCGCGGTA GATGCGGCGG TCAACACCGT GGCACAAATT CGTGAAGCTT TTGGCAATCA GATTGAGTTT GGTCTTGATT TCCACGGTCG CGTCAGCGCG CCGATGGCGA AAGTACTGAT TAAAGAACTG GAACCGTATC GCCCGCTGTT TATTGAAGAG CCGGTGCTGG CAGAACAGGC CGAATACTAC CCGAAACTGG CGGCACAAAC GCATATTCCA CTGGCGGCGG GTGAGCGCAT GTTCTCACGT TTCGATTTTA AACGTGTGCT GGAGGCGGGT GGTATTTCGA TTCTGCAACC GGATCTCTCC CACGCAGGCG GTATTACCGA ATGCTACAAA ATTGCCGGAA TGGCAGAAGC CTATGACGTG ACCCTTGCGC CGCACTGTCC GCTCGGACCG ATTGCACTGG CAGCTTGCCT GCATATCGAC TTTGTTTCCT ATAACGCCGT ACTTCAGGAA CAAAGTATGG GCATTCATTA CAACAAAGGC GCGGAGTTAC TCGACTTTGT GAAAAACAAA GAGGACTTCA GCATGGTCGG CGGCTTCTTT AAACCGCTAA CGAAACCGGG CTTAGGCGTG GAAATCGACG AAGCTAAAGT TATTGAGTTC AGTAAAAATG CCCCGGACTG GCGTAATCCG CTCTGGCGTC ATGAAGATAA CAGCGTAGCA GAGTGGTAA
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Protein sequence | MKITKITTYR LPPRWMFLKI ETDEGVVGWG EPVIEGRART VEAAVHELGD YLIGQDPSRI NDLWQVMYRA GFYRGGPILM SAIAGIDQAL WDIKGKVLNS PVWQLMGGLV RDKIKAYSWV GGDRPANVID GIKILREIGF DTFKLNGCEE LGLIDNSRAV DAAVNTVAQI REAFGNQIEF GLDFHGRVSA PMAKVLIKEL EPYRPLFIEE PVLAEQAEYY PKLAAQTHIP LAAGERMFSR FDFKRVLEAG GISILQPDLS HAGGITECYK IAGMAEAYDV TLAPHCPLGP IALAACLHID FVSYNAVLQE QSMGIHYNKG AELLDFVKNK EDFSMVGGFF KPLTKPGLGV EIDEAKVIEF SKNAPDWRNP LWRHEDNSVA EW
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