Gene EcSMS35_1095 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcSMS35_1095 
Symbol 
ID6144841 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli SMS-3-5 
KingdomBacteria 
Replicon accessionNC_010498 
Strand
Start bp1110613 
End bp1111761 
Gene Length1149 bp 
Protein Length382 aa 
Translation table11 
GC content52% 
IMG OID641615979 
Productgalactonate dehydratase 
Protein accessionYP_001743171 
Protein GI170680994 
COG category[M] Cell wall/membrane/envelope biogenesis
[R] General function prediction only 
COG ID[COG4948] L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones54 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAATCA CCAAAATTAC CACGTATCGT TTACCTCCCC GCTGGATGTT CCTGAAAATT 
GAAACCGATG AAGGCGTGGT CGGCTGGGGC GAGCCCGTGA TCGAAGGCCG CGCCCGTACG
GTGGAAGCGG CAGTTCACGA GCTGGGTGAC TATTTGATTG GTCAGGATCC ATCGCGCATC
AATGACTTAT GGCAAGTGAT GTATCGCGCC GGATTTTATC GTGGAGGTCC AATCCTGATG
AGCGCCATTG CCGGGATCGA CCAGGCGTTA TGGGATATCA AAGGCAAAGT GCTGAATTCG
CCGGTCTGGC AACTGATGGG CGGCCTGGTG CGTGACAAAA TTAAAGCCTA CAGTTGGGTC
GGCGGCGATC GTCCGGCGAA TGTTATCGAC GGAATAAAAA TCCTGCGCGA AATCGGTTTT
GATACCTTCA AACTGAATGG TTGTGAAGAA CTGGGGCTAA TTGATAACTC CCGCGCGGTA
GATGCGGCGG TCAACACCGT GGCACAAATT CGTGAAGCTT TTGGCAATCA GATTGAGTTT
GGTCTTGATT TCCACGGTCG CGTCAGCGCG CCGATGGCGA AAGTACTGAT TAAAGAACTG
GAACCGTATC GCCCGCTGTT TATTGAAGAG CCGGTGCTGG CAGAACAGGC CGAATACTAC
CCGAAACTGG CGGCACAAAC GCATATTCCA CTGGCGGCGG GTGAGCGCAT GTTCTCACGT
TTCGATTTTA AACGTGTGCT GGAGGCGGGT GGTATTTCGA TTCTGCAACC GGATCTCTCC
CACGCAGGCG GTATTACCGA ATGCTACAAA ATTGCCGGAA TGGCAGAAGC CTATGACGTG
ACCCTTGCGC CGCACTGTCC GCTCGGACCG ATTGCACTGG CAGCTTGCCT GCATATCGAC
TTTGTTTCCT ATAACGCCGT ACTTCAGGAA CAAAGTATGG GCATTCATTA CAACAAAGGC
GCGGAGTTAC TCGACTTTGT GAAAAACAAA GAGGACTTCA GCATGGTCGG CGGCTTCTTT
AAACCGCTAA CGAAACCGGG CTTAGGCGTG GAAATCGACG AAGCTAAAGT TATTGAGTTC
AGTAAAAATG CCCCGGACTG GCGTAATCCG CTCTGGCGTC ATGAAGATAA CAGCGTAGCA
GAGTGGTAA
 
Protein sequence
MKITKITTYR LPPRWMFLKI ETDEGVVGWG EPVIEGRART VEAAVHELGD YLIGQDPSRI 
NDLWQVMYRA GFYRGGPILM SAIAGIDQAL WDIKGKVLNS PVWQLMGGLV RDKIKAYSWV
GGDRPANVID GIKILREIGF DTFKLNGCEE LGLIDNSRAV DAAVNTVAQI REAFGNQIEF
GLDFHGRVSA PMAKVLIKEL EPYRPLFIEE PVLAEQAEYY PKLAAQTHIP LAAGERMFSR
FDFKRVLEAG GISILQPDLS HAGGITECYK IAGMAEAYDV TLAPHCPLGP IALAACLHID
FVSYNAVLQE QSMGIHYNKG AELLDFVKNK EDFSMVGGFF KPLTKPGLGV EIDEAKVIEF
SKNAPDWRNP LWRHEDNSVA EW