Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcSMS35_1074 |
Symbol | |
ID | 6146034 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli SMS-3-5 |
Kingdom | Bacteria |
Replicon accession | NC_010498 |
Strand | + |
Start bp | 1088380 |
End bp | 1089231 |
Gene Length | 852 bp |
Protein Length | 283 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 641615961 |
Product | IS150 transposase orfB |
Protein accession | YP_001743153 |
Protein GI | 170679947 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG2801] Transposase and inactivated derivatives |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 43 |
Fosmid unclonability p-value | 0.274968 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAAAGTAC TCAACGAGCT AAGGCAGTTT TATCCTCTTG ATGAGCTTCT CAGGGCTGCG GAGATACCGC GCAGTACGTT TTATTACCAT CTAAAGGCTC TCAGCAAGCC TGACAAGTAT GCGGACGTTA AAAAGCGTAT TGGTGAGATT TATCACGAGA ATAGAGGCCG ATACGGATAC CGTAGGGTAA CGCTGTCTCT TCATCGAGAA GGGAAACAGA TTAACCATAA AGCTGTTCAG CGCCTGATGG GAACCCTCTC ACTTAAAGCA GCGATTAAGG TCAAGCGATA CCGCTCTTAC AGAGGAGAGG TAGGGCAAAC CGCCCCTAAT GTTCTCCAAA GAGATTTCAA GGCTACGCGG CCAAACGAGA AGTGGGTTAC CGATGTTACT GAATTTGCAG TCAATGGGCG CAAGCTGTAT TTGTCTCCAG TAATAGATCT CTTCAACAAC GAAGTTATTT CTTACAGCCT TTCGGAAAGA CCAGTGATGA ACATGGTTGA GAATATGCTC GATCAGGCAT TCAAAAAGCT TAATCCTCAC GAGCATCCTG TTCTGCACTC TGACCAGGGA TGGCAGTATC GTATGAGAAA ATATCAAAAT ATTCTTAAAG AACATGGTAT TAAACAAAGC ATGTCCAGAA AAGGCAATTG TCTGGATAAT GCTGTGGTGG AGTGTTTCTT TGGAACCTTA AAGTCGGAGT GTTTTTATCT TGATGAGTTC AGTAATATAA GCGAACTGAA GGATGCTGTT ACGGAATATA TTGAATACTA CAACAGCAGA AGAATTAGCC TGAAATTAAA AAGTCTGACT CCAATTGAAT ATCGGAATCA GACCTATATG CCTCGTGTTT AA
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Protein sequence | MKVLNELRQF YPLDELLRAA EIPRSTFYYH LKALSKPDKY ADVKKRIGEI YHENRGRYGY RRVTLSLHRE GKQINHKAVQ RLMGTLSLKA AIKVKRYRSY RGEVGQTAPN VLQRDFKATR PNEKWVTDVT EFAVNGRKLY LSPVIDLFNN EVISYSLSER PVMNMVENML DQAFKKLNPH EHPVLHSDQG WQYRMRKYQN ILKEHGIKQS MSRKGNCLDN AVVECFFGTL KSECFYLDEF SNISELKDAV TEYIEYYNSR RISLKLKSLT PIEYRNQTYM PRV
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