Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcSMS35_1054 |
Symbol | |
ID | 6144474 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli SMS-3-5 |
Kingdom | Bacteria |
Replicon accession | NC_010498 |
Strand | + |
Start bp | 1072068 |
End bp | 1073126 |
Gene Length | 1059 bp |
Protein Length | 352 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 641615940 |
Product | hypothetical protein |
Protein accession | YP_001743132 |
Protein GI | 170681607 |
COG category | [S] Function unknown |
COG ID | [COG1289] Predicted membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 42 |
Fosmid unclonability p-value | 0.205497 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCGTGCCG ATAAGTCATT AAGCCCGTTT GAAATCCGGG TATACCGCCA TTACCGCATT GTGCATGGTA CTCGGGTCGC GCTGGCATTC CTGCTCACTT TTCTCATTAT CCGCCTGTTT ACTATCCCGG AAAGCACCTG GCCGCTGGTC ACCATGGTGG TGATTATGGG GCCAATCTCG TTCTGGGGGA ACGTTGTCCC TCGTGCCTTC GAACGTATTG GCGGTACGGT GTTGGGTTCG ATTTTAGGTC TTATCGCTCT GCAACTGGAG TTAATTTCGT TACCGCTGAT GTTAGTCTGG TGCGCGGCGG CGATGTTTCT TTGCGGTTGG CTGGCGCTGG GCAAGAAACC GTATCAAGGA TTATTGATTG GGGTGACGCT GGCAATTGTT GTGGGTTCCC CGACAGGTGA AATTGATACG GCGTTATGGC GAAGCGGCGA TGTGATCCTC GGCTCTTTAC TGGCAATGTT GTTTACCGGT ATCTGGCCAC AACGGGCGTT CATCCACTGG CGCATTCAAC TGGCGAAAAG TCTGACCGAG TATAATCGGG TCTATCAATC TGCATTCTCA CCGAACTTAC TCGAACGCCC ACGTCTGGAA AGCCATCTAC AAAAACTGCT GACCGATGCC GTGAAAATGC GTGGGCTGAT TGCGCCCGCC AGCAAAGAAA CCCGTATTCC AAAATCGATA TATGAAGGTA TCCAGACCAT TAACCGCAAT CTGGTTTGTA TGCTGGAGTT GCAAATCAAT GCATACTGGG CCACGCGCCC CAGCCATTTC GTGTTATTGA ACGCGCAAAA ACTTCGTGAT ACCCAGCACA TGATGCAGCA AATACTGCTG AGCCTTGTTC ATGCGCTGTA CGAAGGTAAT CCGCAGCCGG TTTTTGCCAA TACGGAAAAA TTGAACGATG CTGTGGAAGA GCTGCGTCTG TTGCTTAATA ACCACCATGA CCTGAAGGTT GTGGAAACAC CAATCTATGG TTATGTGTGG CTGAACATGG AAACGGCGCA TCAGCTTGAG TTGCTATCGA ATCTGATTTG CCGGGCCTTG CGCAAATAA
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Protein sequence | MRADKSLSPF EIRVYRHYRI VHGTRVALAF LLTFLIIRLF TIPESTWPLV TMVVIMGPIS FWGNVVPRAF ERIGGTVLGS ILGLIALQLE LISLPLMLVW CAAAMFLCGW LALGKKPYQG LLIGVTLAIV VGSPTGEIDT ALWRSGDVIL GSLLAMLFTG IWPQRAFIHW RIQLAKSLTE YNRVYQSAFS PNLLERPRLE SHLQKLLTDA VKMRGLIAPA SKETRIPKSI YEGIQTINRN LVCMLELQIN AYWATRPSHF VLLNAQKLRD TQHMMQQILL SLVHALYEGN PQPVFANTEK LNDAVEELRL LLNNHHDLKV VETPIYGYVW LNMETAHQLE LLSNLICRAL RK
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