| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_1052 |
|---|
| Symbol | gyrI |
|---|
| ID | 6142950 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli SMS-3-5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010498 |
|---|
| Strand | + |
|---|
| Start bp | 1071397 |
|---|
| End bp | 1071870 |
|---|
| Gene Length | 474 bp |
|---|
| Protein Length | 157 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 641615939 |
|---|
| Product | DNA gyrase inhibitor |
|---|
| Protein accession | YP_001743131 |
|---|
| Protein GI | 170680306 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG3449] DNA gyrase inhibitor |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 42 |
|---|
| Fosmid unclonability p-value | 0.170354 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACTACG AGATTAAGCA GGAAGATAAA CGTACCGTTG CAGGTTTCCA TCTCGTTGGC
CCGTGGGAAC AGACGGTAAA GAAAGGCTTT GAGCAGTTGA TGATGTGGAT AGATAGCAAA
AATATTGTGC CGAAGGAGTG GGTTGCTGTC TATTACGACA ATCCAGATGA AACACCCGCC
GAAAAATTAC GCTGCGACAC CGTCGTGACG GTGCCGAATA ACTTTACGCT CCCCGAAAAC
AGTGAGGGCG TCATTCTGAC AGAAATTTCA GGTGGTCAGT ATGCGGTGGC GGTGGCTCGT
GTAGTCGGTG ATGATTTTGC TAAACCCTGG TATCAGTTCT TTAATAGCCT CTTGCAGGAC
AGTGCCTATG AAATGTTACC AAAGCCCTGC TTCGAGGTTT ACTTGAACAA TGGCGCGGAA
GATGGGTACT GGGATATCGA AATGTATGTT GCGGTGCAGC CAAAACATCA CTAA
|
|---|
| Protein sequence | MNYEIKQEDK RTVAGFHLVG PWEQTVKKGF EQLMMWIDSK NIVPKEWVAV YYDNPDETPA
EKLRCDTVVT VPNNFTLPEN SEGVILTEIS GGQYAVAVAR VVGDDFAKPW YQFFNSLLQD
SAYEMLPKPC FEVYLNNGAE DGYWDIEMYV AVQPKHH
|
|---|
| |