Gene EcSMS35_1047 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcSMS35_1047 
Symbol 
ID6145361 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli SMS-3-5 
KingdomBacteria 
Replicon accessionNC_010498 
Strand
Start bp1067134 
End bp1068192 
Gene Length1059 bp 
Protein Length352 aa 
Translation table11 
GC content51% 
IMG OID641615934 
ProductYeeE/YedE family membrane protein 
Protein accessionYP_001743126 
Protein GI170680499 
COG category[R] General function prediction only 
COG ID[COG2391] Predicted transporter component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.588627 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones40 
Fosmid unclonability p-value0.12651 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTTTCAA TGATATTAAG CGGGCTAATT TGTGGTGCTC TGCTGGGATT TGTCATGCAG 
CGTGGGCGTT TTTGCCTGAC AGGTGGTTTT CGCGATATGT ATGTCGCGAA AAATAATCGC
ATGTTTTACG CCTTGCTGAT TGCAATTTCG GTACAAAGCG TGGGGGTTTT TGCGTTAATT
CAGGCGGGCC TACTGACTTA CGAAGCCGGG GCGTTCCCGT GGCTTGGTAC TGTTATAGGT
GGGTATCTTT TCGGGCTGGG AATTGTTCTG GCGGGTGGAT GTGCCACCGG GACCTGGTAT
CGCGCGGGTG AGGGATTGAT CGGCAGTTGG ATCGCGCTTT TCACTTATAT GGTGATGAGT
GCGGTGATGC GTTCTCCACA CGCCAGTGGT TTAAATCAAA CCTTGCAGCA CTACACTACT
GAACATAACT CTATTGCTGA TACTTTTAAT TTGTCTGTGT GGCCGTTGGT TGCCGTTTTG
CTGGTGATAA CGCTCTGGGT GGTGATGAAA GAGTTGAAGA AGCCAAAACT CAAAGTCGCG
ACCTTACCGC CGCGCCGAAC CGGGATCGCT CATATTCTGT TTGAAAAACG CTGGCATCCC
TTTGTCACAG CTGTACTCAT CGGTTTGATT GCGCTTTTAG CCTGGCCCCT GAGTGAAGCA
ACCGGACGTA TGTTTGGGTT AGGCATCACT TCCCCAACGG CCAATATTCT GCAATTTCTG
GTCGCGGGTG ACGTGAAATA CATTAACTGG GGCGTTTTCC TGGTGTTAGG GAGCTTCGTG
GGGTCATTTA TTGCCGCCAA AGCGAGCCGT GAGTTCCGCG TTCGCGCTGC TGATGCACAA
ACAACATTAC GTAGCGGGTT AGGTGGTGTA CTGATGGGCT TCGGTGCCAG CATTGCAGGT
GGTTGCTCTA TCGGTAATGG ACTGGTCATG ACTGCAATGA TGACCTGGCA GGGCTGGATT
GGCCTTGTAT TTATGATTCT CGGAGTCTGG ACTGCGTCCT GGCTTGTGTA TGTTCGACCG
CAGCGTAAGG CGCGACTGGC AACTGCTGCG GCAAATTAA
 
Protein sequence
MFSMILSGLI CGALLGFVMQ RGRFCLTGGF RDMYVAKNNR MFYALLIAIS VQSVGVFALI 
QAGLLTYEAG AFPWLGTVIG GYLFGLGIVL AGGCATGTWY RAGEGLIGSW IALFTYMVMS
AVMRSPHASG LNQTLQHYTT EHNSIADTFN LSVWPLVAVL LVITLWVVMK ELKKPKLKVA
TLPPRRTGIA HILFEKRWHP FVTAVLIGLI ALLAWPLSEA TGRMFGLGIT SPTANILQFL
VAGDVKYINW GVFLVLGSFV GSFIAAKASR EFRVRAADAQ TTLRSGLGGV LMGFGASIAG
GCSIGNGLVM TAMMTWQGWI GLVFMILGVW TASWLVYVRP QRKARLATAA AN