Gene EcSMS35_1027 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcSMS35_1027 
Symbol 
ID6146594 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli SMS-3-5 
KingdomBacteria 
Replicon accessionNC_010498 
Strand
Start bp1049057 
End bp1050235 
Gene Length1179 bp 
Protein Length392 aa 
Translation table11 
GC content29% 
IMG OID641615914 
Productputative polysaccharide biosynthesis protein 
Protein accessionYP_001743106 
Protein GI170682445 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones49 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGAAAG AAATTTATAA ATATGGCACA ATAATATTAT GCTATGGAAT TAACTTTATA 
CTACCTATTC TTTTCTTTAA AGAAATAAGT TTAATATTAT CTCCAATAGT ATTATCATCA
TTTTTCTTTG TTTTGGCATT GCTAATGTAT TGTCAATTCA TTGTTGAATA CGGGTTGCAA
ATATCATTAT TAAGAAAGTT AAATGAAAAT AAGAGTGATT TAAGTCGGCT TTTATCTACT
ATTCTTGGAC TAAAAGTAAT ACTATTCGTC CTATGCGCAG TATTCATTTA TTGTATTTTG
CTATATAATA ATGAAGTTAT ATTTTTTATA CTTGTTTTCA TTCTGCTAGG AAACGTATTC
TCATGCCAGT TCCTCTATCA AGTAGTTGAT CAGCTCCATT TTTTTTATGT ATTAAATTCG
CTTGTTAAGC TAATTTTCAT ACCCCTCATT TTTATCAATG ATAATTATAT CTATCTGATG
ATATGTTATA GTTGTTTCAA TATCCTACCT AACTTAGCTG CACTTGCTTA TTTTTTATAT
AAGAATAAAG TTAAGGTTGT AAAAGTTCCT GCTTGTGAAA TTTATAATTT ATCTAAGGAA
TGTTTTAGCT ATTTTATCTC GAATATTTCG ATAACATTAT ACACTAATTT TTATCAGATC
TTATTAGGCA TTATATCGCC CGCTTATCTG GCCGCGTATG CATTAAGTGA CAAAATTATT
AGGGGGATCG TGTCAGGGAA TTATGTGTTT ATACAGATAG TACAAGTACA ATACTTAAAT
GATGAATCAA AGTTCATCAA TGGTACATGG AAAACGATTG TTTCATTATT ATTACTGGGG
GGGATGGAGT TTTTATTTAT TTTCTTTGGA GCGGATTTTT TCTCTCGTTA TTTATTCCCT
ACAATATCTT TACTGCCAAT TTTTCTAAAA CTAATGTCAT TGCTAATTGT TGTTATCTTG
TTGAGTAACT TTTTTGCAAT GGTTTATCTT CCGTGTTCAG GCAATACTTT ATTCCTCTCA
CGTGTTCTGA TTTTTGTTTC TATTGTGTCC GTAGTAGTTG CCCCGATACT AATATGGCTC
TATGCAGGTT ATGGTGCAGT CATTTCCGCT ATATTTTCAG AGTTATTAGT TCTGATTTTA
TGCTATGGTT TATATTTGAA ATTAAAACAC AAACTCTAA
 
Protein sequence
MKKEIYKYGT IILCYGINFI LPILFFKEIS LILSPIVLSS FFFVLALLMY CQFIVEYGLQ 
ISLLRKLNEN KSDLSRLLST ILGLKVILFV LCAVFIYCIL LYNNEVIFFI LVFILLGNVF
SCQFLYQVVD QLHFFYVLNS LVKLIFIPLI FINDNYIYLM ICYSCFNILP NLAALAYFLY
KNKVKVVKVP ACEIYNLSKE CFSYFISNIS ITLYTNFYQI LLGIISPAYL AAYALSDKII
RGIVSGNYVF IQIVQVQYLN DESKFINGTW KTIVSLLLLG GMEFLFIFFG ADFFSRYLFP
TISLLPIFLK LMSLLIVVIL LSNFFAMVYL PCSGNTLFLS RVLIFVSIVS VVVAPILIWL
YAGYGAVISA IFSELLVLIL CYGLYLKLKH KL