Gene EcSMS35_1022 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcSMS35_1022 
Symbol 
ID6144887 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli SMS-3-5 
KingdomBacteria 
Replicon accessionNC_010498 
Strand
Start bp1043457 
End bp1044278 
Gene Length822 bp 
Protein Length273 aa 
Translation table11 
GC content32% 
IMG OID641615909 
Productglycosyl transferase, group 2 
Protein accessionYP_001743101 
Protein GI170680029 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.0371517 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones54 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAATA AGTGCCCACG AATTGCAGTA ATAATGTCGG TTTATATTAA TGATAAATTT 
AATGAGTTTA AAGAGGCTTT TGACAGTATT ATTAATCAAA CATACTCTAA CTTTGTTTTC
TTTATTTATG CCGATGGCAA GATAAATCCA GATATTGAAA GTTTTTTGCA AAATTATAAT
TCGCAACATG TGATTTTCAT TAGAAGTGAA AAAAATAAGG GATTAGCTTA TGCTTTGAAT
AAATTAATAT CAGTGGCGCT AGTTAATAAT GAATTTGATT TTATTGCCAG AATGGATGCT
GATGATATAA GTTTAGAAGA TAGATTTCAA CGACAAATAG ATTTTTTTAT GGCTAACCCT
GAGTTAGATG TTGTTGGTGG GTTGTGTCAA GAGTTTGGTG GTGAGTCAGC AAGAGAAAAA
TGCAAGATCT ATTTTACAGA TGAAGCCATT AAAAACAATG CCTTTAAAAA ATGTCCTTTC
GTTCATCCAA CCGTGATGTT TAAATCGTCT GTATTTAATA ACGGGATGCG ATACCCTGAA
AATCAGCCAC TGACAGAAGA TATGTGCTTA TGGCTCGAGT TAATATCCGC GAATAAAAAG
TTTGCAAATA TTGACTCCGT TCTTCTAAAG TACAGAATTA ATGAGCAGAC GCTAAAAAGA
AGAAGAGGTT TGAATAAGGC TGTAACCGAA TTATCCACAA GATTGTATTA CGCCAAGAAA
CTTAAAATGC TTAGCGTACG GAATTTGTTA TATATATTAA TCCATTTTGG TGTCAGAGTC
CTTCCTTCAA ATATATTTAA ACTTGTACAT AAGTTAAATT AA
 
Protein sequence
MKNKCPRIAV IMSVYINDKF NEFKEAFDSI INQTYSNFVF FIYADGKINP DIESFLQNYN 
SQHVIFIRSE KNKGLAYALN KLISVALVNN EFDFIARMDA DDISLEDRFQ RQIDFFMANP
ELDVVGGLCQ EFGGESAREK CKIYFTDEAI KNNAFKKCPF VHPTVMFKSS VFNNGMRYPE
NQPLTEDMCL WLELISANKK FANIDSVLLK YRINEQTLKR RRGLNKAVTE LSTRLYYAKK
LKMLSVRNLL YILIHFGVRV LPSNIFKLVH KLN