| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_0996 |
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| Symbol | asmA |
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| ID | 6143404 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli SMS-3-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010498 |
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| Strand | + |
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| Start bp | 1013338 |
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| End bp | 1015191 |
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| Gene Length | 1854 bp |
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| Protein Length | 617 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 641615883 |
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| Product | putative assembly protein |
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| Protein accession | YP_001743075 |
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| Protein GI | 170681043 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG2982] Uncharacterized protein involved in outer membrane biogenesis |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 53 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGACGAT TTCTGACGAC GCTGATGATA CTCCTGGTCG TGCTGGTGGC CGGGTTATCT
GCGTTAGTGT TGCTGGTGAA TCCGAATGAT TTCCGCGACT ATATGGTCAA GCAAGTTGCT
GCACGTAGCG GTTATCAATT GCAGCTCGAC GGGCCACTGC GTTGGCACGT CTGGCCGCAG
CTTAGTATCC TCTCCGGGCG AATGTCTCTC ACCGCCCAGG GCGCGAGCCA GCCACTGGTT
CGCGCCGACA ACATGCGTCT GGACGTGGCG CTTTTACCAC TACTGAGTCA TCAACTGAGC
GTTAAGCAGG TGATGCTAAA AGGGGCAGTG ATTCAACTGA CGCCGCAGAC GGAAGCGGTG
CGCAGTGAAG ACGCTCCGGT TGCACCGCGC GACAATACCT TGCCGGATCT GTCAGACGAT
CGCGGATGGT CGTTTGATAT ATCCAGTCTT AAGGTGGCGG ACAGCGTGCT GGTGTTCCAG
CATGAAGATG ACGAGCAGGT GACAATCCGC AATATTCGCC TGCAAATGGA ACAAGATCCC
CAACATCGTG GCTCATTTGA GTTCTCCGGG CGGGTTAATC GCGATCAGCG CGATCTCACG
ATATCCCTTA ACGGTACGGT AGATGCTTCT GATTATCCGC ATGATTTAAC GGCGGCTATT
GAACAAATTA ACTGGCAGTT GCAGGGTGCC GATTTACCAA AACAAGGTAT TCAGGGGCAG
GGGAGTTTCC AGGCCCAGTG GCAGGAGTCA CATAAACGCC TTTCATTTAA CCAAATTAGT
TTGACCGCCA ATGACAGTAC GCTGAGCGGG CAAGCACAGG TCACGTTGAC AGAGAAACCG
GAATGGCAGC TGAGACTGCA ATTCCCGCAA CTGAATCTTG ACAACCTCAT CCCCCTTAAT
GAAACAGCGA ACGGTGAGAA CGGTGCCGCG CAGCAAGGGC AGAGCCAATC AACGTTGCCG
CGCCCGGTCA TTTCTTCGCG TATTGATGAA CCGGCCTATC AGGGACTGCA AGGCTTTACG
GCTGATATTT TGTTGCAGGC CAGTAACGTG CGCTGGCGCG GAATGAATTT TACAGATGTT
GCCACGCAAA TGACCAACAA GTCGGGTTTG CTGGAAATTA CTCAACTGCA GGGCAAACTT
AACGGTGGAC AGGTTTCACT GCCGGGCACG CTGGACGCGA CATCAATAAA TCCGCGGATA
AACTTCCAGC CACGGCTGGA AAACGTTGAG ATTGGCACCA TTCTGAAGGC GTTTAACTAT
CCGATTTCGT TGACCGGAAA GATGTCACTG GCTGGTGATT TCTCCGGTGC TGACATAGAT
GCCGACGCAT TCCGCCATAA CTGGCAAGGA CAGGCACATG TCGAAATGAC CGACACGCGC
ATGGAAGGGA TGAACTTCCA GCAGATGATT CAGCAAGCGG TAGAACGTAA TGGTGGTGAT
GTGAAGGCCG CTGAAAACTT CGATAACGTA ACGCGTCTTG ACCGCTTTAC CACCGATTTG
ACGTTGAAGG ATGGCGTCGT GACGTTAAAC GACATGCAAG GTCAATCGCC AGTGCTGGCG
CTGACAGGGG AAGGCATGTT GAATCTGGCA GATCAAACCT GCGACACCCA GTTTGACATT
CGTGTGATTG GTGGTTGGAA CGGGGAAAGC AAACTGATTG ATTTCCTCAA AGAAACGCCA
GTACCGCTGC GGGTTTATGG CAACTGGCAG CAACTCAATT ACAGCCTGCA AGTGGATCAG
TTACTGCGCA AACATCTACA GGACGAAGCG AAACGTCGCC TGAATGACTG GGCCGAGCGG
AATAAAGATT CCCGCAATGG CAAAGATGTG AAGAAGTTGC TGGAGAAGAT GTAA
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| Protein sequence | MRRFLTTLMI LLVVLVAGLS ALVLLVNPND FRDYMVKQVA ARSGYQLQLD GPLRWHVWPQ
LSILSGRMSL TAQGASQPLV RADNMRLDVA LLPLLSHQLS VKQVMLKGAV IQLTPQTEAV
RSEDAPVAPR DNTLPDLSDD RGWSFDISSL KVADSVLVFQ HEDDEQVTIR NIRLQMEQDP
QHRGSFEFSG RVNRDQRDLT ISLNGTVDAS DYPHDLTAAI EQINWQLQGA DLPKQGIQGQ
GSFQAQWQES HKRLSFNQIS LTANDSTLSG QAQVTLTEKP EWQLRLQFPQ LNLDNLIPLN
ETANGENGAA QQGQSQSTLP RPVISSRIDE PAYQGLQGFT ADILLQASNV RWRGMNFTDV
ATQMTNKSGL LEITQLQGKL NGGQVSLPGT LDATSINPRI NFQPRLENVE IGTILKAFNY
PISLTGKMSL AGDFSGADID ADAFRHNWQG QAHVEMTDTR MEGMNFQQMI QQAVERNGGD
VKAAENFDNV TRLDRFTTDL TLKDGVVTLN DMQGQSPVLA LTGEGMLNLA DQTCDTQFDI
RVIGGWNGES KLIDFLKETP VPLRVYGNWQ QLNYSLQVDQ LLRKHLQDEA KRRLNDWAER
NKDSRNGKDV KKLLEKM
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