Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcSMS35_0994 |
Symbol | udk |
ID | 6146575 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli SMS-3-5 |
Kingdom | Bacteria |
Replicon accession | NC_010498 |
Strand | + |
Start bp | 1012002 |
End bp | 1012643 |
Gene Length | 642 bp |
Protein Length | 213 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 641615881 |
Product | uridine kinase |
Protein accession | YP_001743073 |
Protein GI | 170680056 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG0572] Uridine kinase |
TIGRFAM ID | [TIGR00235] uridine kinase |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 51 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACTGATC AGTCTCATCA GTGCGTCATT ATCGGTATCG CTGGCGCATC GGCTTCCGGC AAGAGTCTTA TTGCCAGTAC CCTTTATCGT GAATTACGTG AGCAAGTCGG TGATGAACAC ATCGGCGTAA TTCCCGAAGA CTGCTATTAC AAAGATCAAA GCCATCTGTC GATGGAAGAA CGCGTTAAGA CCAACTACGA CCATCCCAGC GCGATGGATC ACAGCCTGTT GCTTGAGCAT TTACAAGCGT TGAAACGCGG CTCGGCCATT GACCTGCCGG TTTACAGCTA TGTTGAACAT ACGCGTATGA AAGAAACGGT GACGGTTGAG CCGAAGAAAG TCATCATTCT CGAAGGCATT TTGCTGCTGA CGGATGCGCG TTTGCGTGAC GAACTTAACT TCTCCATTTT CGTTGATACC CCGCTGGATA TCTGCCTGAT GCGCCGCATC AAGCGTGACG TTAACGAGCG TGGGCGTTCA ATGGATTCAG TGATGGCGCA ATATCAAAAA ACCGTGCGTC CGATGTTCCT GCAATTCATT GAGCCTTCTA AACAATATGC GGACATTATC GTGCCGCGCG GCGGGAAAAA CCGCATCGCC ATCGATATAT TGAAAGCGAA AATAAGTCAG TTCTTTGAAT AA
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Protein sequence | MTDQSHQCVI IGIAGASASG KSLIASTLYR ELREQVGDEH IGVIPEDCYY KDQSHLSMEE RVKTNYDHPS AMDHSLLLEH LQALKRGSAI DLPVYSYVEH TRMKETVTVE PKKVIILEGI LLLTDARLRD ELNFSIFVDT PLDICLMRRI KRDVNERGRS MDSVMAQYQK TVRPMFLQFI EPSKQYADII VPRGGKNRIA IDILKAKISQ FFE
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