| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_0986 |
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| Symbol | mdtA |
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| ID | 6144829 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli SMS-3-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010498 |
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| Strand | - |
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| Start bp | 999683 |
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| End bp | 1000930 |
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| Gene Length | 1248 bp |
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| Protein Length | 415 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 641615873 |
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| Product | multidrug efflux system subunit MdtA |
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| Protein accession | YP_001743065 |
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| Protein GI | 170683959 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 46 |
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| Fosmid unclonability p-value | 0.607592 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAGGCA GTTATAAATC CCGTTGGGTA ATCGTAATCG TGGTGGTTAT CGCCGCCATC
GCCGCATTCT GGTTCTGGCA AGGCCGCAAT GACTCCCGGA GTGCAGCCCC AGGGGCGACG
AAACAAGCGC AGCAATCGCC AGCGGGTGGT CGCCGTGGTA TGCGTTCCGG CCCATTAGCC
CCGGTTCAGG CGGCGACCGC CGTAGAACAG GCTGTTCCGC GTTACCTCAC CGGGCTTGGC
ACCATTACCG CCGCTAATAC TGTTACGGTG CGCAGCCGCG TGGACGGTCA ACTGATGGCG
TTGCATTTCC AGGAAGGCCA GCAGGTCAAA GCTGGCGATT TATTGGCAGA AATTGACCCC
AGCCAGTTCA AAGTTGCATT AGCACAAGCC CTGGGCCAAC TGGCAAAAGA TAAAGCCACG
CTTGCCAACG CCCGCCGTGA CCTGGCGCGT TATCAACAAC TGGTAAAAAC CAATCTCGTA
TCTCGTCAGG AACTGGATGC CCAACAAGCG CTGGTCAGTG AAACCGAAGG TACCATTAAG
GCTGATGAAG CAAGCGTCGC CAGCGCGCAA TTGCAACTCG ACTGGAGCCG TATCACCGCA
CCAGTTGATG GTCGCGTTGG TCTCAAGCAG GTTGATGTTG GTAACCAAAT CTCCAGTGGC
GACACCACCG GGATTGTGGT GATCACCCAA ACACATCCTA TCGATCTGGT CTTTACTCTG
CCGGAAAGCG ATATCGCCAC CGTTGTACAG GCACAAAAAG CCGGAAAACC GCTGGTGGTA
GAAGCCTGGG ATCGCACCAA CTCGAAGAAG TTAAGTGAAG GCACGCTGTT AAGCCTTGAT
AACCAAATCG ATGCCACTAC CGGTACGATT AAAGTGAAAG CTCGCTTTAA TAATCAGGAT
GATGCGCTTT TCCCTAATCA GTTTGTTAAC GCGCGCATGT TAGTCGACAC CGAACAAAAC
GCCGTGGTGA TCCCCACCGC CGCTCTGCAA ATGGGCAACG AAGGCCATTT TGTCTGGGTG
CTGAATAGCG AAAACAAGGT CAGCAAACAT CTGGTGACAC CGGGCATTCA GGACAGTCAG
AGAGTGGTGA TCCGCGCAGG TATTTCTGCG GGCGATCGCG TGGTGACGGA TGGCATTGAT
CGCCTGACCG AAGGGGCGAA AGTGGAAGTG GTGGAAGCCC AGAGCGCCAC CACTTCGGAA
GAGAAAGCCA CCAGCCGCGA ATACGCGAAA AAAGGAGCAC GCTCCTGA
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| Protein sequence | MKGSYKSRWV IVIVVVIAAI AAFWFWQGRN DSRSAAPGAT KQAQQSPAGG RRGMRSGPLA
PVQAATAVEQ AVPRYLTGLG TITAANTVTV RSRVDGQLMA LHFQEGQQVK AGDLLAEIDP
SQFKVALAQA LGQLAKDKAT LANARRDLAR YQQLVKTNLV SRQELDAQQA LVSETEGTIK
ADEASVASAQ LQLDWSRITA PVDGRVGLKQ VDVGNQISSG DTTGIVVITQ THPIDLVFTL
PESDIATVVQ AQKAGKPLVV EAWDRTNSKK LSEGTLLSLD NQIDATTGTI KVKARFNNQD
DALFPNQFVN ARMLVDTEQN AVVIPTAALQ MGNEGHFVWV LNSENKVSKH LVTPGIQDSQ
RVVIRAGISA GDRVVTDGID RLTEGAKVEV VEAQSATTSE EKATSREYAK KGARS
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