Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcSMS35_0981 |
Symbol | baeR |
ID | 6145148 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli SMS-3-5 |
Kingdom | Bacteria |
Replicon accession | NC_010498 |
Strand | - |
Start bp | 989948 |
End bp | 990670 |
Gene Length | 723 bp |
Protein Length | 240 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 641615868 |
Product | DNA-binding transcriptional regulator BaeR |
Protein accession | YP_001743060 |
Protein GI | 170680336 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.443633 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 47 |
Fosmid unclonability p-value | 0.661259 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACCGAGT TACCAATCGA CGAAAACACG CCACGTATTT TGATCGTGGA AGATGAACCG AAGCTGGGGC AGTTACTCAT TGATTATCTG CGTGCTGCGA GCTATGCGCC GACGCTTATC AGCCACGGCG ATCAGGTACT GCCATATGTG CGCCAGACAC CACCGGATCT GATCCTGTTG GATCTGATGC TCCCTGGCAC CGATGGCCTG ACGTTGTGTC GGGAGATTCG TCGTTTTTCT GACATTCCGA TCGTGATGGT GACAGCAAAA ATCGAAGAGA TCGACCGCCT GCTCGGGCTG GAGATTGGCG CAGATGACTA CATCTGCAAA CCGTACAGCC CACGGGAAGT GGTAGCGCGC GTCAAAACCA TTTTGCGCCG TTGCAAACCG CAGCGTGAGT TGCAGCAACA GGATGCTGAA AGCCCGTTGA TTATCGACGA AGGTCGTTTT CAGGCTTCAT GGCGCGGAAA AATGCTTGAC CTGACGCCTG CGGAATTTCG TCTGCTGAAA ACGCTCTCTC ATGAACCAGG AAAAGTGTTC TCCCGCGAGC AATTGCTCAA TCATCTTTAT GACGACTACC GCGTAGTAAC CGACCGCACC ATCGACAGCC ACATTAAAAA CCTGCGCCGC AAGCTGGAAT CTCTCGACGC CGAACAGTCA TTTATCCGCG CCGTTTACGG CGTCGGTTAC CGCTGGGAAG CCGACGCCTG CCGCATCGTT TAA
|
Protein sequence | MTELPIDENT PRILIVEDEP KLGQLLIDYL RAASYAPTLI SHGDQVLPYV RQTPPDLILL DLMLPGTDGL TLCREIRRFS DIPIVMVTAK IEEIDRLLGL EIGADDYICK PYSPREVVAR VKTILRRCKP QRELQQQDAE SPLIIDEGRF QASWRGKMLD LTPAEFRLLK TLSHEPGKVF SREQLLNHLY DDYRVVTDRT IDSHIKNLRR KLESLDAEQS FIRAVYGVGY RWEADACRIV
|
| |