Gene EcSMS35_0980 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcSMS35_0980 
Symbol 
ID6146477 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli SMS-3-5 
KingdomBacteria 
Replicon accessionNC_010498 
Strand
Start bp989436 
End bp989768 
Gene Length333 bp 
Protein Length110 aa 
Translation table11 
GC content48% 
IMG OID641615867 
Producthypothetical protein 
Protein accessionYP_001743059 
Protein GI170680967 
COG category[S] Function unknown 
COG ID[COG3422] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.920473 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones47 
Fosmid unclonability p-value0.600438 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTGGTT GGTTTGAACT CAGTAAGAGC AGTGATAATC AATTCCGGTT TGTGCTAAAA 
GCGGGCAATG GTGAGACTAT CCTCACCAGC GAGCTGTATA CCTCAAAAGC CTCTGCGGAA
AAGGGCATCG CGTCGGTACG TAGCAACAGC CCGCAAGAAG AACGCTATGA GAAAAAAACG
GCAAGCAACG GCAAATTCTA TTTCAATCTG AAAGCCGCCA ATCATCAAAT TATCGGCTCC
AGCCAGATGT ACGCCACCGC GCAATCTCGT GAAACCGGAA TTGCCTCCGT TAAAGCCAAT
GGCACAAGCC AGACGGTAAA AGATAATACG TAA
 
Protein sequence
MAGWFELSKS SDNQFRFVLK AGNGETILTS ELYTSKASAE KGIASVRSNS PQEERYEKKT 
ASNGKFYFNL KAANHQIIGS SQMYATAQSR ETGIASVKAN GTSQTVKDNT