| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_0971 |
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| Symbol | gatB |
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| ID | 6144812 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli SMS-3-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010498 |
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| Strand | + |
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| Start bp | 981518 |
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| End bp | 981802 |
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| Gene Length | 285 bp |
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| Protein Length | 94 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 641615858 |
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| Product | PTS system galactitol-specific transporter subunit IIB |
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| Protein accession | YP_001743050 |
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| Protein GI | 170680100 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3414] Phosphotransferase system, galactitol-specific IIB component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 45 |
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| Fosmid unclonability p-value | 0.366549 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAAACGCA AGATTATTGT CGCTTGCGGA GGCGCGGTTG CGACCTCCAC GATGGCGGCG
GAAGAAATTA AAGAGTTGTG TCAGAGTCAT AATATTCCTG TTGAATTAAT CCAGTGTCGG
GTTAATGAAA TAGAAACCTA TATGGATGGC GTGCATTTGA TATGCACCAC GGCCAGGGTG
GATCGTAGTT TTGGCGATAT TCCGTTAGTT CACGGCATGC CTTTTGTTTC TGGTGTCGGT
ATCGAAGCAT TACAAAATAA AATTCTGACT ATCTTACAGG GGTGA
|
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| Protein sequence | MKRKIIVACG GAVATSTMAA EEIKELCQSH NIPVELIQCR VNEIETYMDG VHLICTTARV
DRSFGDIPLV HGMPFVSGVG IEALQNKILT ILQG
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