Gene EcSMS35_0964 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcSMS35_0964 
Symbol 
ID6145845 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli SMS-3-5 
KingdomBacteria 
Replicon accessionNC_010498 
Strand
Start bp973382 
End bp974128 
Gene Length747 bp 
Protein Length248 aa 
Translation table11 
GC content51% 
IMG OID641615850 
ProductGntR family transcriptional regulator 
Protein accessionYP_001743042 
Protein GI170681641 
COG category[K] Transcription 
COG ID[COG2188] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones50 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAACAAG CGCATACCCA GCTGATTGCC CAACTGAACG AACGTATTTT AGCGGCGGAT 
AACACGCCGC TTTATATTAA GTTTGCCGAA ACGGTAAAAA ATGCCGTGCG CAGCGGGGTG
CTGGAGCATG GCAATATTTT GCCCGGTGAG CGTGATTTAA GTCAGTTAAC CGGCGTTTCG
CGCATTACGG TGCGCAAGGC GATGCAGGCG CTGGAAGAAG AGGGCGTGGT GACGCGTTCG
CGTGGTTACG GTACGCAGAT CAACAACATC TTCGAATACT CGTTGAAAGA AGCGCGAGGT
TTTTCTCAGC AGGTGGTATT GCGCGGGAAA AAGCCCGATA CGCTATGGGT TAACAAGCGT
GTCGTGAAAT GTCCCGAAGA AGTTGCGCAG CAGCTGGCGG TCGAAGCGGG AAGTGATGTC
TTTTTGCTTA AGCGTATTCG CTATGTCGAT GAAGAAGCGG TATCGATTGA GGAATCGTGG
GTTCCGGCAC ATTTAATTCA TGATGTTGAT GCCATCGGGA TTTCTCTTTA TGACTACTTC
CGCAGCCAGC ACATTTACCC ACAACGTACG CGTTCCCGCG TTAGCGCCCG GATGCCGGAT
GCCGAGTTTC AGTCACATAT TCAGTTAGAT AGCAAAATAC CGGTGCTGGT GATCAAGCAA
GTGGCGCTTG ACCAACAGCA ACGGCCTATT GAGTACAGCA TCAGCCACTG TCGCAGCGAT
CTATACGTTT TCGTGTGCGA GGAGTAG
 
Protein sequence
MEQAHTQLIA QLNERILAAD NTPLYIKFAE TVKNAVRSGV LEHGNILPGE RDLSQLTGVS 
RITVRKAMQA LEEEGVVTRS RGYGTQINNI FEYSLKEARG FSQQVVLRGK KPDTLWVNKR
VVKCPEEVAQ QLAVEAGSDV FLLKRIRYVD EEAVSIEESW VPAHLIHDVD AIGISLYDYF
RSQHIYPQRT RSRVSARMPD AEFQSHIQLD SKIPVLVIKQ VALDQQQRPI EYSISHCRSD
LYVFVCEE