Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcSMS35_0964 |
Symbol | |
ID | 6145845 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli SMS-3-5 |
Kingdom | Bacteria |
Replicon accession | NC_010498 |
Strand | + |
Start bp | 973382 |
End bp | 974128 |
Gene Length | 747 bp |
Protein Length | 248 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 641615850 |
Product | GntR family transcriptional regulator |
Protein accession | YP_001743042 |
Protein GI | 170681641 |
COG category | [K] Transcription |
COG ID | [COG2188] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 50 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAACAAG CGCATACCCA GCTGATTGCC CAACTGAACG AACGTATTTT AGCGGCGGAT AACACGCCGC TTTATATTAA GTTTGCCGAA ACGGTAAAAA ATGCCGTGCG CAGCGGGGTG CTGGAGCATG GCAATATTTT GCCCGGTGAG CGTGATTTAA GTCAGTTAAC CGGCGTTTCG CGCATTACGG TGCGCAAGGC GATGCAGGCG CTGGAAGAAG AGGGCGTGGT GACGCGTTCG CGTGGTTACG GTACGCAGAT CAACAACATC TTCGAATACT CGTTGAAAGA AGCGCGAGGT TTTTCTCAGC AGGTGGTATT GCGCGGGAAA AAGCCCGATA CGCTATGGGT TAACAAGCGT GTCGTGAAAT GTCCCGAAGA AGTTGCGCAG CAGCTGGCGG TCGAAGCGGG AAGTGATGTC TTTTTGCTTA AGCGTATTCG CTATGTCGAT GAAGAAGCGG TATCGATTGA GGAATCGTGG GTTCCGGCAC ATTTAATTCA TGATGTTGAT GCCATCGGGA TTTCTCTTTA TGACTACTTC CGCAGCCAGC ACATTTACCC ACAACGTACG CGTTCCCGCG TTAGCGCCCG GATGCCGGAT GCCGAGTTTC AGTCACATAT TCAGTTAGAT AGCAAAATAC CGGTGCTGGT GATCAAGCAA GTGGCGCTTG ACCAACAGCA ACGGCCTATT GAGTACAGCA TCAGCCACTG TCGCAGCGAT CTATACGTTT TCGTGTGCGA GGAGTAG
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Protein sequence | MEQAHTQLIA QLNERILAAD NTPLYIKFAE TVKNAVRSGV LEHGNILPGE RDLSQLTGVS RITVRKAMQA LEEEGVVTRS RGYGTQINNI FEYSLKEARG FSQQVVLRGK KPDTLWVNKR VVKCPEEVAQ QLAVEAGSDV FLLKRIRYVD EEAVSIEESW VPAHLIHDVD AIGISLYDYF RSQHIYPQRT RSRVSARMPD AEFQSHIQLD SKIPVLVIKQ VALDQQQRPI EYSISHCRSD LYVFVCEE
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